Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00162 ATGCATTTCGCGAAACTCGATGATTCGCCCATGTTCCGGCAACAGCTCCAATGCTTGGAAGAAAGTGCAGAATCCTTAAAGACGAGATGCTGGAAGTACTACAAAGCATGTCGCAAGTACACGGAAGGGCTTGGCGAGGGATATGATGGAGACATTGCATTTGCAAGTGCCCTTGAAAGTTTTGGAGGAGGGCATAGTGATCCTCTTTTTGTTGCTTTGGGAGGACCGGTTATGACCAAATTCACAATTGCTTTGAGAGAAATCGGTACATACAAAGAAGTTCTTCGGTCACAGGTAGAGCAGATGCTGAATGACCGATTGCTACAATATATCAATGTCGACATTCTTGAAGTCAAGGAAGCTAGGAAGCGATTTGACAAGGCTTCCATTGTATACGACCAGGCACGTGATAAATTTATGTCATTGAGAAAGAGCACGAAGATTGATATTACCAATGTCATAGAAGAGGAATTGCACAATGCAAGATCCTCATTTGAGGAAGCCCGCTTCAATCTGGTCAGTGCTCTTAATAATGTTGAGACAAAGAAGAGATTTGAATTTTTGGAGGCTGTCACTGTAGTTATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTGTTGCATCAGATGGAACCTTTCATTGCCGAGGTTCTTGACTATGCACAACAGTCAAGAGAAAGTTCCAATAAGGAGCAAAATTCTCTCAATGAAAGAATGCAAGATTACAAAAGACAAGCTGATCAAGAAAGTAGGCTGTCCTTGAATGGCCCTCATGGTTCTCCTGGTAGAGACTGTGCGCATTTTCCTAGAATATCGAATGAAGTGGCAGATGCAGTAATAGAATCTGCTTCAAATGGAAAGGTTCAAATTATTCGGCAAGGATTTCTTTCAAAACGGTCCTCCAATCTGAGGGCTGACTGGAAGAGAAGGTATTTTGTTCTTGATAGTCGAGGGATGCTGTACTACTATCGCAAACCATGGAACTGGTCATATGGTGGCAGTCAACCATCTGCACCAAGGAATAGTGCAACAGAAAATGGTTCTGGTCTTCTGAGCCGGTTGCTTTCTTCCCATTATCATGGGGGCGTCCATGATGAAAGATCTATGGCACGTCATGCAGTGAACCTGCTTACATCAACAATTAAAGCCGATGCTGATCAGTCGGATTTAAGATTCTGCTTCAGGATTATTTCCCCATCAAAAAGCTATACATTGCAGGCAGAAAATGCACTGGACCAGATGGCTTGGATTGAAAAGATAACTGGAGTAATTGCCTCCTTGTTGAGTGTGCAGACAATAGAAAAGCCTCTCTCAGCTGAACCAGAAAGCGGTGACTTTCAATCTGCTGGAAAGATTATGTTTGCAAATTGTCCAGGTTATGATCATGGTGTGACTCAGGAACATGCATCGAAGAATTTCACTTCTAATAACCACTTAAGAACATCAAAAAGTTTGCAGTACCATCGACAGAGTGCAAAAGGTGAAAAGCCAATCGACATTCTTCGAAGAGTATGCGGGAATGACAAATGTGCTGATTGTGGTAAACCTGAACCTGACTGGGCATCCCTAAACCTTGGGATTCTTATATGCATCGAATGTTCTGGTGTTCATCGGAATCTCGGTGTACATATATCAAAGGTAAGATCATTGACACTTGATGTGAAAGTCTGGGACCCCTCTGTCTTAACCATGTTTCAGTCACTGGGCAATCTCTTCGCCAACTCTGTTTGGGAAGAGCTGTTGCATTCAACAAACACTTTGCAAACTGATGACGCGCCTGTATGTTTATCCAAGGCCAACGATAACAAGCTATCTCATGTGAGGAAACCAAAACATGATGATCCTATTTCATTGAAGGAGAGGTTCATTCATGCAAAGTATTCGGAGAAAGTCTTTGTTCGCCATATAATGAAAGACCAGCGTCTCCTTTCAGTGGCACAAGAAGTGTGGGAAAGTGTTCGTGCCAATGATAAGAAAGTACTATACCGTCTTATCGTCGGGTCAAACGTGGATGTCAATGCTATCAGCGATCAAGCATCATATCGTATGTATACTTTTGTATTTCGACTCCAAGAAAGATTTTGCTGTTGAAAAAGCATAAAGTCATTAGTTGCATTCCAGGTGACTCTTTCAACATGCCTTCAAGTAATTCAGACTCATCATGTAAAAGTGAAAATCAGTTAATAGAAGACAAACACGAT 2207 0.4205 MHFAKLDDSPMFRQQLQCLEESAESLKTRCWKYYKACRKYTEGLGEGYDGDIAFASALESFGGGHSDPLFVALGGPVMTKFTIALREIGTYKEVLRSQVEQMLNDRLLQYINVDILEVKEARKRFDKASIVYDQARDKFMSLRKSTKIDITNVIEEELHNARSSFEEARFNLVSALNNVETKKRFEFLEAVTVVMDAHLRYFQQGYQLLHQMEPFIAEVLDYAQQSRESSNKEQNSLNERMQDYKRQADQESRLSLNGPHGSPGRDCAHFPRISNEVADAVIESASNGKVQIIRQGFLSKRSSNLRADWKRRYFVLDSRGMLYYYRKPWNWSYGGSQPSAPRNSATENGSGLLSRLLSSHYHGGVHDERSMARHAVNLLTSTIKADADQSDLRFCFRIISPSKSYTLQAENALDQMAWIEKITGVIASLLSVQTIEKPLSAEPESGDFQSAGKIMFANCPGYDHGVTQEHASKNFTSNNHLRTSKSLQYHRQSAKGEKPIDILRRVCGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPSVLTMFQSLGNLFANSVWEELLHSTNTLQTDDAPVCLSKANDNKLSHVRKPKHDDPISLKERFIHAKYSEKVFVRHIMKDQRLLSVAQEVWESVRANDKKVLYRLIVGSNVDVNAISDQASYRMYTFVFRLQERFCC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00162 698 CDD ArfGap 500 629 - -
Bach5g00162 698 SMART 5bar 2 218 IPR004148 GO:0005515|GO:0005737
Bach5g00162 698 Gene3D Arf GTPase activating protein 477 642 IPR038508 -
Bach5g00162 698 CDD BAR_SFC_plant 15 215 IPR035670 -
Bach5g00162 698 SMART arf_gap_3 497 642 IPR001164 GO:0005096
Bach5g00162 698 SMART PH_update 292 429 IPR001849 -
Bach5g00162 698 PRINTS HIV Rev interacting protein signature 509 528 IPR001164 GO:0005096
Bach5g00162 698 PRINTS HIV Rev interacting protein signature 528 545 IPR001164 GO:0005096
Bach5g00162 698 PRINTS HIV Rev interacting protein signature 551 572 IPR001164 GO:0005096
Bach5g00162 698 CDD PH_ACAP 294 431 - -
Bach5g00162 698 SUPERFAMILY PH domain-like 203 426 - -
Bach5g00162 698 ProSiteProfiles PH domain profile. 291 427 IPR001849 -
Bach5g00162 698 SUPERFAMILY BAR/IMD domain-like 6 314 IPR027267 -
Bach5g00162 698 ProSiteProfiles ARF GTPase-activating proteins domain profile. 497 642 IPR001164 GO:0005096
Bach5g00162 698 PANTHER CENTAURIN/ARF 3 669 IPR045258 GO:0005096
Bach5g00162 698 MobiDBLite consensus disorder prediction 243 266 - -
Bach5g00162 698 Coils Coil 227 254 - -
Bach5g00162 698 SUPERFAMILY ArfGap/RecO-like zinc finger 498 637 IPR037278 -
Bach5g00162 698 Coils Coil 118 138 - -
Bach5g00162 698 Gene3D - 284 438 IPR011993 -
Bach5g00162 698 Pfam PH domain 293 426 IPR001849 -
Bach5g00162 698 Pfam BAR domain of APPL family 6 235 IPR004148 GO:0005515|GO:0005737
Bach5g00162 698 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 479 643 - -
Bach5g00162 698 Gene3D Arfaptin homology (AH) domain/BAR domain 4 251 IPR027267 -
Bach5g00162 698 Pfam Putative GTPase activating protein for Arf 500 636 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00162 Bach-Chr5 1146168 1155594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00162 492 636 C2H2 Transcription Factor Family AT4G21160 36.986 2.86e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00162 K12489 - qsa:O6P43_023509 1017.68