Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00157 ATGGATCCAGAATCATTCACCAACAGCATATTTAAGTGGGACCCTCGCAGCTTCCTTCCAATGGCAACGACTAGCCGACCTCCTATGCTGGACTACTCGATGTCTATGGCTCCACCAGTACAGGTGGCGCCGAGGGCTCCCAGGGAGCTAGGAGGCTTAGAGGAGTTCTTCCAGGCTTATGGCATCAGATACTATACAGCAACCAAAATAGCGGAACTTGGGTTCACGGTGAATACCCTTGTGGACATGAAGGACGAGGAGATCGATGACATGATGAATAATCTCTCTCAGATTTTCCGTTGGGATCTGCTCGTTGGGGAGCGGTATGGTGTCAAAGCCGCCATTAGAGCTGAACGAAGACGCATAGACGAAAACGAAAGCAGGCCCCGCAACCTTCTCTCTGCGGACACCACCCCCACCAACGTACTTGATGCTTTATCCCAGGAAGGGTTGTCGGAGGAGCCGGTGGTGCAACACGAAAAAGAGGCGATGGGAAGCGGAGCAGGGAGTACGTGGGACATGGCAGGTGTGGCGGAGAGGAGGAAACAGAGGAGGAGGCGAAGGATGAGATCTAAGACTATTAGTCATGGGCATCAGAATGATGATCCAGGAGTAGAAGAGGAAGAAGGTAAAGGAAATGATGAGGGCAACAATATTAACAGCGGTGGTGGAGAGTGTGGAAGCTGCGAGAGACAGAGAGAACACCCATTCATCGTCACCGAGCCTGGGGAGGTTGCACGTGGCAAGAAAAACGGCCTTGATTACCTTTTTCACCTCTACGAGCAATGCCAAGAGTTCTTGATTCAAGTCCAGAACATCGCCAAGGACCGCGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTATTCAGGTACGCCAAGAAAGCAGGAGCAAGCTACATTAACAAGCCAAAAATGCGACACTACGTCCACTGCTATGCTTTGCACTGTCTTGACGAGGAGGTTTCCAATGAACTGAGAAGAGCTTTCAAGGAGAGAGGAGAGAACGTTGGGGCTTGGAGACAAGCTTGCTATAAGCCACTTGTGGCTATCGCAGCACGATCAGGTTGGGACATTGATGCCGTCTTCAATGCACATCCTCGTCTTTCCATTTGGTATGTCCCAACCAAGCTTCGCCAGCTTTGTCATGCCGAGAGGAACAGTGCCACTGCTTCAACCTCTGTCTCCATTGGGACTACTCATCTTCCTTTTTAA 1215 0.5111 MDPESFTNSIFKWDPRSFLPMATTSRPPMLDYSMSMAPPVQVAPRAPRELGGLEEFFQAYGIRYYTATKIAELGFTVNTLVDMKDEEIDDMMNNLSQIFRWDLLVGERYGVKAAIRAERRRIDENESRPRNLLSADTTPTNVLDALSQEGLSEEPVVQHEKEAMGSGAGSTWDMAGVAERRKQRRRRRMRSKTISHGHQNDDPGVEEEEGKGNDEGNNINSGGGECGSCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCQEFLIQVQNIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARSGWDIDAVFNAHPRLSIWYVPTKLRQLCHAERNSATASTSVSIGTTHLPF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00157 404 MobiDBLite consensus disorder prediction 150 228 - -
Bach5g00157 404 MobiDBLite consensus disorder prediction 194 214 - -
Bach5g00157 404 Gene3D Protein LEAFY 227 396 IPR038276 -
Bach5g00157 404 PANTHER PROTEIN LEAFY 1 402 IPR002910 GO:0003677|GO:0006355
Bach5g00157 404 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 226 390 IPR035209 GO:0003677
Bach5g00157 404 Pfam Floricaula / Leafy protein SAM domain 49 126 IPR035079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00157 Bach-Chr5 1101144 1103335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00157 1 398 Orphan Transcription Factor Family AT5G61850 62.712 9.53e-158 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Bach5g00157 C_LFY_FLO 1.3e-107 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00157 - - gsj:114416001 614.764