Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00113 ATGGGAGATGGTATTGTAGGCGGCAGCAGCAACCGGGGCAATCCCCACAACAGCAGTAGTAGCGGAAATAGTGGCAATAGCAATAAGCCCGAGTGGCTACAACAATACGATCTGATAGGGAAGATTGGTGAAGGTACATATGGTCTTGTATTCCTTGCAAGAATCAAGTCTCCAACCAATCGCGGAAAATCCATTGCCATCAAGAAATTCAAGCAGTCGAAGGATGGTGATGGCGTCTCACCTACTGCCATTCGTGAAATTATGTTACTCAGGGAGATAACACACGAAAACGTTGTGAAGCTTGTGAATGTTCACATCAATCATGCTGACATGTCTCTGTATCTGGCTTTTGATTATGCTGAACATGACCTTTATGAAATCATCAGACATCATAGGGACAAGGTCAACCTTTCCATTAATCAATACACTGTTAAGTCATTACTCTGGCAGCTGCTTAATGGATTAAACTATCTGCATAGTAATTGGATTATTCATCGTGATCTAAAGCCATCAAATATATTGGTTATGGGTGAAGGAGAAGAACATGGTGTGGTTAAAATTGCTGACTTTGGACTTGCAAGAATATATCAGGCCCCTTTGAAGTCGTTATCTGAAAATGGAGTTGTTGTGACCATTTGGTATCGTGCACCTGAGTTGCTTCTTGGGGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTTGGATGCATATTTGCTGAGCTGTTGACCTTGAAGCCACTATTTCAAGGGGCAGAAGTCAAAGCCACGCCAAATCCTTTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTCTAGGCCATCCAACATTGGAAAAATGGCCTTCCCTTGCGAATCTTCCCCATTGGCAGCAAGATGTACAGCATATACAAGGGCACAAATATGACAACACTGGCCTTTATAATGTTGTTCATCACCTGTCTCCAAAGAGTCCTGCTTATGACCTTTTGTCAAAGATGCTTGAATATGATCCTCGGAAACGTATAACAGCTGCACAAGCTTTAGAGCATGAGTATTTTAAAATGGAACCACTACCTGGGCGGAATGCACTAGTACCCTGCCAACCTGGAGAGAAAATTGTGAATTATCCCATACGTCCAGTGGACACAACGACAGATTTTGAAGGGACAACCAATCTTCAACCTTCACAACCGGTTTCGTCTGGAACAGCAGTTTCTGGCAACATGCCAGGCGCCCATGTGTCAAGTAGACCTGTCCCTCGTCCAATAAATGTTGTTGGCATGCAAAGGATGCCCCCTCAGGCAATGCAAGGCCCATCAGCAGCAACAGTTGAGAAGGAGAGACCAAGGAATGGGGATGCCAGGATACCCTCCCCAGCAGAAGTCACGGCGTATATAAGGTTTTACTGGCAGAAATCAAGTGAAGATAGACTAAGGACAACATTTCGATACCTGAACTCGTTGATGACACTTCAGGATTTGAAGTTCAGTTCAGATGGTTTGCGTTCGTTTCTTGCAAACCACGCATCATGCCCATTATAA 1524 0.4383 MGDGIVGGSSNRGNPHNSSSSGNSGNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSPTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNLSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKSLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNTGLYNVVHHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKIVNYPIRPVDTTTDFEGTTNLQPSQPVSSGTAVSGNMPGAHVSSRPVPRPINVVGMQRMPPQAMQGPSAATVEKERPRNGDARIPSPAEVTAYIRFYWQKSSEDRLRTTFRYLNSLMTLQDLKFSSDGLRSFLANHASCPL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00113 507 MobiDBLite consensus disorder prediction 383 404 - -
Bach5g00113 507 FunFam Cyclin-dependent kinase e-1 24 119 - -
Bach5g00113 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bach5g00113 507 PANTHER CELL DIVISION PROTEIN KINASE 34 353 - -
Bach5g00113 507 ProSiteProfiles Protein kinase domain profile. 36 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00113 507 Gene3D Transferase(Phosphotransferase) domain 1 120 362 - -
Bach5g00113 507 ProSitePatterns Protein kinases ATP-binding region signature. 42 69 IPR017441 GO:0005524
Bach5g00113 507 FunFam Putative cyclin-dependent kinase E-1 120 360 - -
Bach5g00113 507 Pfam Protein kinase domain 36 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00113 507 MobiDBLite consensus disorder prediction 1 29 - -
Bach5g00113 507 SUPERFAMILY Protein kinase-like (PK-like) 31 349 IPR011009 -
Bach5g00113 507 MobiDBLite consensus disorder prediction 10 29 - -
Bach5g00113 507 SMART serkin_6 36 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00113 507 MobiDBLite consensus disorder prediction 383 413 - -
Bach5g00113 507 MobiDBLite consensus disorder prediction 426 450 - -
Bach5g00113 507 CDD STKc_CDK8_like 35 347 - -
Bach5g00113 507 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00113 Bach-Chr5 821642 828225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00113 29 432 Core Cell Cycle Gene Families AT5G63610 81.481 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Bach5g00113 Pkinase 2.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00113 K02208 - gmx:100813433 766.533