Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00112 CGAAAACGTCGGATTCTGGCATAGGAATTCAATCTTTCTTATTCAGTTCTGCTGCTGGGACTCTTTTACTGCAGAAACTTGAGATTTGCAAGTAATATAAGAATTGTTCTGGAGCATTGAAGGTTCTATATTTTCCTAGATCGCATACAAATCCCTCTCTTGGACTCATTCCAAGGCCTGGCGTTATGCTAAAACCCTCCAGTTCCTTTTACCATTGGAACAAAAGCTTCTTTTTGGTGTTTGTTTTGTGTTGGAGTGCCAGGGTCTGTTATATCGTCAGTGGTCATATACAATGAAGAAGGTGACCTTATGAGTAACATTAATTTAGCCATTGGAACATAATGGTCAAATAATCTGAAAGCACTAGTTGTATATTTCAACTTAAAGATACAACTTATTAAATGGGTAGGGAAATTTCGTCAGAAATGAAAAAGGAAGAAGTCAGGGATGATGGTTCCTCAAGTGGTGAGACCGAGGATTTAGAATCTCACTCGGAACATAGTCTGGAGAAGGAGACAGGCTGGAGAAGTTGTCGTGTGTGCCAATGTGCTGAATCTGATAAAAGGGGAGATGCTGCACTAGAATTTTTGGGCATTACTCCAATTATAGAAGTGTGTAAAAGTAACGGAGAAGTGAGCTCTAGTGGCCAGGAAATTCCGAATGATGTGTCTCTTAAAAGAAATATTGGAAGCAAATCTGGGGTGGTGGAATTTGTAAGCCCTGATGGAGAAGTTTTCATTTGTAACACTGATTTGGAAACGGGTCTGTCTCATCAGGACACATTACTTGAACTTGGTTGTTCTTGTAAGGATGACCTTGCTCTTGTACACTATGCTTGTGCACTCAAATGGTTTGTCAACCATGGATCCACTGTTTGTGAAATATGCGGACATCTGGCAAAAAATATCAGAATTTCCGACTTCAATAAAGTTGTTGGTTCTTTGAAGGAGTACGAAACATTGAGGGAAAGAACTGCATGTGGGGAACCAAGTCTTGCTCATGTTCAAGCAAACACTGCTGTGGATTCTGATGCTGTTGCTGCTATTCGGAGGCTAAGGCTAAGTGAGATTGCACTATGGTTTTGCCCACATAATAATAGTAACAATAACAATGCAGACACAGCTTCACAGGTTGTTTCTGAACAACCTTTGAACTCTGTTGCCGAGGAAACTGCCCCTGTTGAAAATACTGCAACTAAGTGGGCCGTAGAAGGAACTGGGATCCTGCTTGCTACTGGATTACTTACTGTCACCCTTGTATGGCTTATAGCTCCTCATGTTGGAAAGAGTACTGCAAGAAGTGGTCTTCATATCCTACTTGGAGGCATTTGTGCTTTGACAGTTGTGGTTTTCTTCCGCTTCTTCGTGCTCACCAGAATCAAGTATGGACCTGCGCGTTATTGGGCAATCTTGTTTGTTTTCTGGTTTCTTGTATTTGGAGTATGGGCTTCACGTACACACAGTGCCCACAAAACATGATCCTTTTCTACAAGTTTCA 1497 0.4135 MGREISSEMKKEEVRDDGSSSGETEDLESHSEHSLEKETGWRSCRVCQCAESDKRGDAALEFLGITPIIEVCKSNGEVSSSGQEIPNDVSLKRNIGSKSGVVEFVSPDGEVFICNTDLETGLSHQDTLLELGCSCKDDLALVHYACALKWFVNHGSTVCEICGHLAKNIRISDFNKVVGSLKEYETLRERTACGEPSLAHVQANTAVDSDAVAAIRRLRLSEIALWFCPHNNSNNNNADTASQVVSEQPLNSVAEETAPVENTATKWAVEGTGILLATGLLTVTLVWLIAPHVGKSTARSGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGVWASRTHSAHKT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00112 358 SUPERFAMILY RING/U-box 125 165 - -
Bach5g00112 358 SMART ringv_2 113 163 IPR011016 GO:0008270
Bach5g00112 358 Pfam RING-variant domain 126 162 IPR011016 GO:0008270
Bach5g00112 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 173 IPR013083 -
Bach5g00112 358 PANTHER ZINC FINGER, RING-CH-TYPE 13 325 - -
Bach5g00112 358 MobiDBLite consensus disorder prediction 1 34 - -
Bach5g00112 358 ProSiteProfiles Zinc finger RING-CH-type profile. 103 169 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00112 Bach-Chr5 815047 818463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00112 1 358 C3H Transcription Factor Family AT5G63780 58.470 1.89e-148 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00112 - - gmx:100805323 511.916