Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00092 ATGCCTTCTGAAGTAACGGACTTAGAAAGTTTTTCCTCATCGTCATACTTCTCTGAAGATATTTTCTCTTCTAAAGAGAGGCAGGTTGGATTACGGGAAGCAGATAAGCATCCCAAATTTTATGCCTCGGAGAAATCTATCACATCATCGTTTATGGAGAGACTTATGCCAGTAGAATATCAGACTGGAAATTTTTTTGAACATTCTGATTCTTTTCTGCCTCAAGACCAGAAAGCAAATCATGGCGCAAATGGACTTGCACTAGGAACAGGTAGCACATGTAGTCATTCCTTGACCCCACTAAGTCATGTGAATTCTGATCAAGGAACAAGATCTAGTTTGAACACACAACCTATGTTCAGTTTTTGGGAAAGCAACAAAGTTGATCTAAATGGCACTCAGCATGAAAGTAGTCTTTTCTCAAGTTCTCTCTCGGAGTTGTTTAGTAGGAAGTTGAGATTATCTACAAATAGTGATCTATACGGCCATTCAGTTGATACTGTAGCGTCTCACTCTGAGGAAGAGAAACATTTTGAGTCCCTTGAAGAACTTGAGGCTCAAACTATTGGAAATCTGCTCCCTAATGATGATGATTTGCTTTCTGGATTGACCGATGGATTTGATCACATCAGCCAAGACAATGGCGGGGATGACACAGAGGAATTAGACCTTTTTAGTAGTGGTGGAGGGATGGATATGGGAGATGATATTTCATCTTCCGGACAAAAGAGTTCTGAATTTGCTGGAGCAGCTTGTGACAGTCAACTAGGGTCATGTAGTGACACAGTCACTGGAGAACACCCTTCTAGAACTTTATTTGTCAGAAATATTAATAGTGACGCTGAAGATTCTGAATTAAAATCACTTTTTGAGCAATATGGAGATATTTGCTCTCTTTATACAGCCTGCAAGCATCGTGGATTTGTTATGATCTCATATTACAATATTAGAGCTGCCCAGAATGCAATGCGAGCACTCCAGAATAGACCATTAAGAGGCAGGAAACTTGACATTCATTATTCAATTCCAAAGAACAATTCTTCAGAGAGAGATATTGATCTGGGCACACTTGTGGTGTTCAGTCTTGATTCCCCTGTTTCAAATGACGAACTTAGCCATATATTTGGTGTCTATGGAGAAATCAAGGAGATCCGTGAAATCCCACAGAAGAGACATCAAAAGTTCATTGAATTTTATGATGTTAGAGCAGCAGAGGCTGCTCTTGGTGCCTCAAACGGAAGTGACATTTCTGGGAAGAGGATAAAGGTTGAGCCAGGCCGAGTTGGAGCTGCAAACCGGTGTATGATGCGACAGATCCATCCAGAATTAGAGCCGGAAAAATCTAACCTTCATATGCATCAGAGCAGCCCTCCTCTTAAGTCACCTACCAGCTTCCTTGGTCCAGGTTTGCTTGGGATAATTACATCTGGTGCTATGGATGATGGAAGAGTTCTGGGTGTTGAGCCTGTTATGCGAGCTTCATCCCTGCACACTGCATTCACTCATGGGATCTCTTCAAGTCTTCCTAACACCTTACCCTCTCTGGTCAGAGTTAAATCAGTTTCCAACCAATGTGGAATAATAACTGAATCTAATTCACCAGGGCAATTAAAAGATATTCAACCCGCATCAACTTTTCATCCTTATTCTCTCCTTGAACATCATGATGGTTTAACTAATGGTGCTCACTTCAATTCTCCTGAGGTGGCTGAAAATATCAACGTTGAGACACAGGAAAGAATGGATAAGATGCACTTTTGTCAAGTAAACCCCAATGGGCACTCCATGGGACTCAAGGAGCGTGTTTTTAAATCTGCTGCTAGTGGGAGCTATCCTCTTCTTAGCCAGAATTACAAATGGAGCAATTCTTATCATTCTCCATCTCTCCAGCCTTCTAGAATGATGTGGCCAAATTCACCATCATATGCAAGTGGAATTTGTGCTGCTCATCCCTTGCCGAGATTGCATGGACTTCCTGGGTCACCATCTCATGTTATGGGGACTGTTTTACCCATAAATAACCACCACGTGGGATCAGCCCCTGCAGTTAACCCTCCTTTTTGGGACAAACGACACACCTATGCAGGAAAATCCCCTGACACTTATAATTTCCATCCTGTCTCTCTTGGGAATATGCCATTTTCCAATAATACACTACATTGTATTGATTTTGTTTCTCATAATATGTTTCCACATGTTGGTGGAAAATGTGTTGACCTTCCCATCCCCCCCAAGAATGTTGGATTCCAATCCCATAACCAAAGATGCATGATTTTTCCTGGTAAAAACCATATGATTTCAACGACTAATTCACTTGATACTCACAGTGACCGTGCTAGAAGCCGTAGAAATGAAGGTGGGTCAAAGCAAGGTGACAGCACGAAACAGTATGAACTTGATATTGACCATATAAAGAGGGGAGAGGATAATCGAACCACACTTATGATAAAGAACATTCCTAACAAGTATACTTCCAAGATGCTACTGGCTGCAATTGATGAGCGCCATAAAGGAACTTATGATTTTATTTATCTACCAATCGATTTCAAGAATAAATGCAACGTGGGATATGCATTCATCAACATGACTAGTCCTAGCTTGATTATACCGTTCTATCAGGCTTTTAATGGGAAGAAGTGGGAGAAATTCAACAGTGAGAAGGTGGCATCGCTTGCATATGGTCGTATACAAGGGAAAGCAGCACTTATTGCTCATTTCCAAAATTCAAGCTTGATGAATGAGGACAAGCGCTGCAGGCCCATCCTCTTCAATACCGATGGCCCTAATGCAGGTGATCAGATGGATCTACAGGTCCCTTTCCCAATGGGTGTCAATGTTCGCAACAGACTTGCAAGAGGGAGAAGCAATAGCCAAGAGGATAACCTGCGAGAAACTGATATGTCTGCCATGGTTTCCGTTCTCACTCAAGTTATGGGATCCTCAAACACAACCACACATCAAAGTCAAAACCCAACCATGGTGCAATCAACCTCCATCTCTGCCGTTAAGGAACAACCATCTCAACCCCTACTAGATCAAGAGATGACGAGGAAAAAGCATTACAGAGGAGTAAGACAAAGACCATGGGGGAAATGGGCAGCTGAAATACGTGATCCCAAGAAAGCTGCCCGAGTGTGGTTGGGCACTTTTGACACAGCTGAGGATGCAGCCATGGCATACGACAAAGCAGCCCTCAAGTTCAAAGGCACAAAAGCGAAGCTTAATTTTCCTGAACGCGTCCAAGGGCTGTCTTGTATTATTGGCTATGATAATCTAAAGGTGCAGGATGAATATTCTAGAAATAAAAACGCCTCTGATTCACCCACTTCTAATGTAGCTACTATTGGTGTTAATGAACCAACCCTTGTGTCTGGGTCTGTTGCTCCTCTCTCATCCACACATATTGAACATGATCATCATCAGCAAGACGTCTTCCCCAACTTGTTTCAGTACGCACAGATTCTCTCCAGCAATGATGCGGAATTACCTTATTATCCATCTCATCTCTTCCATCAACAACCTTTTGCCTCCCAATTTCCCACTACCTTGTCTACGTCCTCATCCACCACATCACCGCCCTTCTACAATAATGAGCCGCAACAACAAGGCCATGGTGACCAATAA 3624 0.4244 MPSEVTDLESFSSSSYFSEDIFSSKERQVGLREADKHPKFYASEKSITSSFMERLMPVEYQTGNFFEHSDSFLPQDQKANHGANGLALGTGSTCSHSLTPLSHVNSDQGTRSSLNTQPMFSFWESNKVDLNGTQHESSLFSSSLSELFSRKLRLSTNSDLYGHSVDTVASHSEEEKHFESLEELEAQTIGNLLPNDDDLLSGLTDGFDHISQDNGGDDTEELDLFSSGGGMDMGDDISSSGQKSSEFAGAACDSQLGSCSDTVTGEHPSRTLFVRNINSDAEDSELKSLFEQYGDICSLYTACKHRGFVMISYYNIRAAQNAMRALQNRPLRGRKLDIHYSIPKNNSSERDIDLGTLVVFSLDSPVSNDELSHIFGVYGEIKEIREIPQKRHQKFIEFYDVRAAEAALGASNGSDISGKRIKVEPGRVGAANRCMMRQIHPELEPEKSNLHMHQSSPPLKSPTSFLGPGLLGIITSGAMDDGRVLGVEPVMRASSLHTAFTHGISSSLPNTLPSLVRVKSVSNQCGIITESNSPGQLKDIQPASTFHPYSLLEHHDGLTNGAHFNSPEVAENINVETQERMDKMHFCQVNPNGHSMGLKERVFKSAASGSYPLLSQNYKWSNSYHSPSLQPSRMMWPNSPSYASGICAAHPLPRLHGLPGSPSHVMGTVLPINNHHVGSAPAVNPPFWDKRHTYAGKSPDTYNFHPVSLGNMPFSNNTLHCIDFVSHNMFPHVGGKCVDLPIPPKNVGFQSHNQRCMIFPGKNHMISTTNSLDTHSDRARSRRNEGGSKQGDSTKQYELDIDHIKRGEDNRTTLMIKNIPNKYTSKMLLAAIDERHKGTYDFIYLPIDFKNKCNVGYAFINMTSPSLIIPFYQAFNGKKWEKFNSEKVASLAYGRIQGKAALIAHFQNSSLMNEDKRCRPILFNTDGPNAGDQMDLQVPFPMGVNVRNRLARGRSNSQEDNLRETDMSAMVSVLTQVMGSSNTTTHQSQNPTMVQSTSISAVKEQPSQPLLDQEMTRKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAMAYDKAALKFKGTKAKLNFPERVQGLSCIIGYDNLKVQDEYSRNKNASDSPTSNVATIGVNEPTLVSGSVAPLSSTHIEHDHHQQDVFPNLFQYAQILSSNDAELPYYPSHLFHQQPFASQFPTTLSTSSSTTSPPFYNNEPQQQGHGDQ 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00092 1207 Gene3D - 259 354 IPR012677 -
Bach5g00092 1207 Pfam AP2 domain 1020 1069 IPR001471 GO:0003700|GO:0006355
Bach5g00092 1207 CDD RRM1_MEI2_like 269 344 IPR034453 -
Bach5g00092 1207 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 355 428 IPR000504 GO:0003723
Bach5g00092 1207 ProSiteProfiles AP2/ERF domain profile. 1020 1077 IPR001471 GO:0003700|GO:0006355
Bach5g00092 1207 FunFam Protein MEI2-like 1 354 449 - -
Bach5g00092 1207 MobiDBLite consensus disorder prediction 1180 1207 - -
Bach5g00092 1207 PANTHER RNA RECOGNITION MOTIF-CONTAINING 94 996 - -
Bach5g00092 1207 Pfam RNA recognition motif 2 811 907 IPR007201 -
Bach5g00092 1207 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 357 422 IPR000504 GO:0003723
Bach5g00092 1207 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 272 336 IPR000504 GO:0003723
Bach5g00092 1207 SUPERFAMILY RNA-binding domain, RBD 267 425 IPR035979 GO:0003676
Bach5g00092 1207 MobiDBLite consensus disorder prediction 775 797 - -
Bach5g00092 1207 Gene3D - 355 440 IPR012677 -
Bach5g00092 1207 PRINTS Ethylene responsive element binding protein signature 1043 1059 IPR001471 GO:0003700|GO:0006355
Bach5g00092 1207 PRINTS Ethylene responsive element binding protein signature 1021 1032 IPR001471 GO:0003700|GO:0006355
Bach5g00092 1207 MobiDBLite consensus disorder prediction 769 797 - -
Bach5g00092 1207 CDD AP2 1019 1078 IPR001471 GO:0003700|GO:0006355
Bach5g00092 1207 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 270 343 IPR000504 GO:0003723
Bach5g00092 1207 SMART rav1_2 1020 1083 IPR001471 GO:0003700|GO:0006355
Bach5g00092 1207 SUPERFAMILY RNA-binding domain, RBD 813 897 IPR035979 GO:0003676
Bach5g00092 1207 Gene3D AP2/ERF domain 1019 1079 IPR036955 GO:0003700|GO:0006355
Bach5g00092 1207 SUPERFAMILY DNA-binding domain 1020 1078 IPR016177 GO:0003677
Bach5g00092 1207 FunFam Ethylene-responsive transcription factor 2 1019 1078 - -
Bach5g00092 1207 CDD RRM3_MEI2_like 814 899 IPR034454 -
Bach5g00092 1207 SMART rrm1_1 271 339 IPR000504 GO:0003723
Bach5g00092 1207 SMART rrm1_1 356 424 IPR000504 GO:0003723
Bach5g00092 1207 SMART rrm1_1 813 889 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00092 Bach-Chr5 685615 694673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00092 966 1081 AP2-EREBP Transcription Factor Family AT5G61890 62.810 2.81e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach5g00092 RRM_2 1.7e-53 CL0221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00092 - - cave:132177398 1197.19