Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00082 ATGGTTAGCCCGAAACGGCGAAGCGGTGAGAGGGTAGACTGCGACTTCTGCACTCAAGAGACAGCGGTTCTGTATTGTAGGGCTGACTCGGCTAAGCTGTGCTTGTTCTGTGACCAACACGTTCACTCGGCTAACTCGCTCTCTCGCAAACATGTCCGTTCTCAGATCTGTGATAATTGTAGCTCGGAGCCAGTCACTGTGCGCTGCAATACAGACAATCTGGTACTATGTCACGACTGCGATTGGGACGCTCACGGTACCTGCTCCGTTTCTGTCTCTCACCATCGCACCCCGGTTGAAGGATTCACCGGATGCCCTTCTGCCTCTCAGCTCGCATCCATCTGGGGTTTCGATTTCGAGGACAAGAAATTCAAATTGGATCATTCATCCTCCTCAGTCACGCCCCCCTTGGATGATTATAGCTATCATTATCATTATAATTATAATTCTAGGGATTTGCTTATGCCCGTGGAGCCGTGGGTGTTTAAGTCGGATGGGATGCCTCTTCAAGACCTCATGGTTCCCAACCATAACGCCGTAGATTGCGACGCATTCAAGAAGCACAGTCCGTCATGTGGGAAGCACAAGCATGTCATACATAAGCAGTTAATGGATTTGCGCAAGAGGGATTTGGTGGCTGGTGCCGGTGCTGTTGGTACTGCACCTAAAATTACAACTGCTAATGATACAGAGAATTTGGTTCCACAGGCTGAAACGGCCAATAATACTAGGGCAAACTTCACTACACAAGGGAGGAATGAAGAAGCATTTGGTTTGGAAAATGGGGTCGATCACTTTCTGGGGACTGCTGCTAGTTCCCAGCAATCATTGCAGCACCAACAAGCGCAAGTTCCATCTTTGTTTATGATGCCCTTGCAGCTGGATCTCAAAGAAGGCGACCAAGTTATGAATCGTAATACTTTGTGGCATAGTAATCCCGAAGGACAGAGTGTTCAGATATGGGATTTTCGTTCTGGACGACTCAGGTGTAATGAAGAACCAGGTGCACATGAAGCTCCATACGCAGAAAGTGATGGAGGATTTATGACTAAAAATTTTGGTGAACTTGTCAGAAAATCGTCCCTGACAGATACAAAAATGTTGGAAGATTTATATGATATGAATATTGCTTATGATGATATGGCGTCATATAACAACATCTCAAATAATCCAACAGCATGTCAGGGGCCTGCAACATCGGAAAGCAATAACCTTCCAATAAGAAAGCAAACTAGCAGTTTGGCCCTTGGAAAGATCAAAGGTTTTTGTACTGCCAAAGAGACGGAGTTGGGGCAACATTCTGTACTAGTCAGAGATGATAATGTGACAAAAACAGCAAGAACTAAGGCTGATATTGAGCTACTGGCACAAAAGAGGGGCAATGCCATGCTCCGTTACAAGGAGAAAAAGAAAACTCGAAGGTACGAGAAGCAGATACGTTACGAGTCCAGGAAGTTGAGAGCTGATACTCGGAAACGGATCAAGGGCAGATTTGTGAAGGCCAGCGATAGCGAAGCACCTAATACTTAA 1530 0.4601 MVSPKRRSGERVDCDFCTQETAVLYCRADSAKLCLFCDQHVHSANSLSRKHVRSQICDNCSSEPVTVRCNTDNLVLCHDCDWDAHGTCSVSVSHHRTPVEGFTGCPSASQLASIWGFDFEDKKFKLDHSSSSVTPPLDDYSYHYHYNYNSRDLLMPVEPWVFKSDGMPLQDLMVPNHNAVDCDAFKKHSPSCGKHKHVIHKQLMDLRKRDLVAGAGAVGTAPKITTANDTENLVPQAETANNTRANFTTQGRNEEAFGLENGVDHFLGTAASSQQSLQHQQAQVPSLFMMPLQLDLKEGDQVMNRNTLWHSNPEGQSVQIWDFRSGRLRCNEEPGAHEAPYAESDGGFMTKNFGELVRKSSLTDTKMLEDLYDMNIAYDDMASYNNISNNPTACQGPATSESNNLPIRKQTSSLALGKIKGFCTAKETELGQHSVLVRDDNVTKTARTKADIELLAQKRGNAMLRYKEKKKTRRYEKQIRYESRKLRADTRKRIKGRFVKASDSEAPNT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00082 509 SMART bboxneu5 9 56 IPR000315 GO:0008270
Bach5g00082 509 SMART bboxneu5 57 99 IPR000315 GO:0008270
Bach5g00082 509 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Bach5g00082 509 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 14 503 - -
Bach5g00082 509 CDD Bbox1_BBX-like 14 56 - -
Bach5g00082 509 ProSiteProfiles CCT domain profile. 459 501 IPR010402 GO:0005515
Bach5g00082 509 Pfam CCT motif 459 501 IPR010402 GO:0005515
Bach5g00082 509 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00082 Bach-Chr5 594003 597268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00082 12 503 C2C2-CO-like Transcription Factor Family AT2G33500 38.821 2.35e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach5g00082 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00082 - - qsa:O6P43_030636 563.918