Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00064 ATGGGAAGGGGAAGAGTGGAGTTGAAGAGAATTGAAAACAAAATCAACAGGCAAGTGACCTTTGCTAAACGAAGGAACGGACTTCTGAAGAAAGCTTACGAGCTTTCCATTCTTTGCGACGCTGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAGCTGTACGAGTTCTCCAGTAGTTCAAGCATGCTCAAAACTCTAGAGAGGTACCAGAAATGCAATTATGGAGCACCCGAGACTAATGTGTCTACAAGGGAGGCTTTGGAGTTAAGCAGTCAGCAGGAATATTTGAAGCTGAAGGCACGTTATGAAGCTCTACAACGAACCCAAAGGAACCTTTTGGGGGAAGATCTTGGTCCTTTAAGCAGCAAAGAGCTCGAATCACTTGAAAGGCAGCTAGATTCCTCCGTGAAGCAGATCCGGTCAACACGAGTACGAAAACTTGCTGGGCGCGGCAAATAG 462 0.461 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLYEFSSSSSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRTQRNLLGEDLGPLSSKELESLERQLDSSVKQIRSTRVRKLAGRGK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00064 153 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bach5g00064 153 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 FunFam MADS-box transcription factor 7 13 98 - -
Bach5g00064 153 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 Pfam K-box region 91 147 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach5g00064 153 ProSiteProfiles K-box domain profile. 89 153 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach5g00064 153 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach5g00064 153 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 143 - -
Bach5g00064 153 Gene3D - 13 98 IPR036879 GO:0003677|GO:0046983
Bach5g00064 153 Coils Coil 126 146 - -
Bach5g00064 153 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00064 Bach-Chr5 474893 478286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00064 1 146 MADS-box Gene Family AT1G24260 89.189 6.08e-91 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach5g00064 K-box 4.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00064 - - tcc:18608957 271.937