Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00056 GTCCACCTGTCTGTCTAGTGGTGAACGTGAATGGAATTGGAAAGCTCCGAATCCATATGCTCGCCAATTTCTCACATTTTAATTCAACGTCCTCGCTCCCTATTAATTTGAGGATTATTGTGACCACTTACGAATGAATGTCTGAGGTTTTCTGATGGAGTTGAACGCAAAATCTCCCTCGCAGTGGGACTGGGAACACCTGTACTTAAATGCAAAAGCAGCCGAAACTCCCAGGTCACCACAATTAGACTGGAGTTCTGAAACAGATCGAGAAATGAATGTCAGGCTGTTCTATTCTTGTTGAGGTAGTGGTTGTTCAGGGTCTGAGATAATGCATGCTTCTTCATCAAGGAGTTCAAAATCAGCTTCCATCAATTCTTCATCAAATGAGGAAAGCAAAACATTAATATTCAACCTTGAAGGTTCCCAAGAAGGTTCTAGTAGTAAGAATGAACTGTCAAAAGACGAGCCTATTGAAACTTCTCCTGCACATGAGCCTTCTTCTGTATCTGGTGAGCCTTTGCTCAGTCTAAAGCTTGGTAAAAGGCTGTACTTTGAAGATGTTTGCCCTGGGAGTGATTCCAAGAACCTGTCCTTCTCTGGGGTTCTGTTGCCGTCTTTGAGTACTGGAAAGAAAGGCAAGTTCAACAGTAAGAGCCCACATCCTCCACGCTGCCAGGTTGAGGGCTGTAACCTTGACCTCACATCAGCAAAAGATTATAATCGTAAACATAGAGTTTGTGAAAGTCATTCCAAATCCCCCAAGGTACTTGTAAATGGTCTGGAACATCATTTTTGCCAGCAATGTAGCAGGTTCCATAGTCTGCCAGAGTTTGATGAGAAAAAGAGAAGCTGCCGACGACGTCTTTCTGATCACAATGCAAGGCGTCGTAAGCCTCATCCTGAAGTAGTCCAGCTAAATCCCTCAGCTTATTCTTTGTCAGAAGATGGTGTTCTTTTTGAATTTTGGTTGACCTTTACTGTTTCTTATTGTTGCATATCCTGCATTAATGAAGAATTACTAATATACATCTTTGTCAGAAGATGGTATTCTTGTTGCTTGTTGATAGGAGGAAAACGGTGGCTTATGGATTGCCAAATATCTGGCCTTAATTCTTATATGTAATGGCTTGTTTAGACAACTTTACAATGAACACGTTTATTGAGATGTATATTTCCTAATCTGTTGTTAGAAGTTAAAATTTAGAATATAATCTGAAATTTAGTTACAAGATAGACGGAGGTCTTAATTGAGTTGCAGTATATCCTGATAAATAACATTTAATATCCTCAACCTAATTTGTAAACATGACATGCAACATATGGAAAGTTTTGTTTCGCATGTGGGAAGTAAACTGACAACAGTGTCAGTGTGCTAGTATATGATGTCACAGTAGTGCAGAAAAAAG 1409 0.3989 MHASSSRSSKSASINSSSNEESKTLIFNLEGSQEGSSSKNELSKDEPIETSPAHEPSSVSGEPLLSLKLGKRLYFEDVCPGSDSKNLSFSGVLLPSLSTGKKGKFNSKSPHPPRCQVEGCNLDLTSAKDYNRKHRVCESHSKSPKVLVNGLEHHFCQQCSRFHSLPEFDEKKRSCRRRLSDHNARRRKPHPEVVQLNPSAYSLSEDGVLFEFWLTFTVSYCCISCINEELLIYIFVRRWYSCCLLIGGKRWLMDCQISGLNSYM 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00056 264 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 201 IPR044817 GO:0003677
Bach5g00056 264 MobiDBLite consensus disorder prediction 1 38 - -
Bach5g00056 264 ProSiteProfiles Zinc finger SBP-type profile. 112 189 IPR004333 GO:0003677
Bach5g00056 264 FunFam Squamosa promoter-binding-like protein 14 106 176 - -
Bach5g00056 264 SUPERFAMILY SBT domain 113 194 IPR036893 GO:0003677|GO:0005634
Bach5g00056 264 Pfam SBP domain 115 188 IPR004333 GO:0003677
Bach5g00056 264 MobiDBLite consensus disorder prediction 1 62 - -
Bach5g00056 264 Gene3D - 106 176 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00056 Bach-Chr5 417996 424236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00056 32 191 SBP-box Gene Family AT5G43270 59.006 1.88e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach5g00056 SBP 3.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00056 - - lja:Lj0g3v0057709.3 277.33