Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00050 ATGAATTCCAAGACGGGTGGACCAAGCTTTCTCAGAGGGAGGAAATTGAAGGTGAACAAGTTTACAGGTGTTGCCGGTGGAGCACGATCCCTGAGGACAGTTTGCGCGGCAGCAGACCCAGACAGGCCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGCCTCCCCGGAGACTTTGGATTTGATCCTCTTGGTCTCGGATCTGATCCTGAGAGCTTGAGATGGAACGTTCAATCTGAGCTTGTGCACTGCAGATGGGCAATGCTGGGTGCTGCTGGCATTTTCATCCCTGAATTCCTAACGAAGATTGGTATTCTAAATACCCCATCATGGTACAGTGCTGGAGAGCTGGAATACTTCACAGACACCACTACCCTCTTCATTATTGAGCTCATTTTGATTGGCTGGGCTGAGGGTAGACGCTGGGCAGATATCATCAAGCCAGGCTCTGTCAACACTGACCCAATCTTTCCCAACAACAAGCTCACAGGGACCGATGTTGGATACCCAGGTGGGCTTTGGTTTGACCCATTGGGCTGGGGAACTGGTTCTCCTGAGAAGATCAAGGAATTGAGGACAAAAGAGATCAAGAACGGAAGATTGGCCATGTTGGCTGTCATTGGTGCCTGGTTCCAACACATTTATACTGGCACTGGTCCTATTGACAACCTCTTTGCCCATCTTGCAGATCCTGGCCACGCAACCATTTTTGCTGCTTTCACTCCCAAGTGA 744 0.5081 MNSKTGGPSFLRGRKLKVNKFTGVAGGARSLRTVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQSELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIIELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00050 247 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 38 245 IPR001344 GO:0009765|GO:0016020
Bach5g00050 247 Gene3D Chlorophyll a/b binding protein domain 52 237 - -
Bach5g00050 247 SUPERFAMILY Chlorophyll a-b binding protein 38 245 - -
Bach5g00050 247 FunFam Chlorophyll a-b binding protein, chloroplastic 52 237 - -
Bach5g00050 247 Pfam Chlorophyll A-B binding protein 51 217 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00050 Bach-Chr5 396153 397230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00050 30 247 Chloroplast and Mitochondria Gene Families AT3G61470 90.367 4.67e-147 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00050 K08908 - gmx:100784089 464.151