Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00036 CAATTGTAAGCTATTCTCATAATTTTTATTACAATTTCCACTGGAGGATTAAGCAAATTCGCATCTCCCTCCCATTCGTTTTTCTCTTTCTCTTCCCTGCCAGCGTGTGTACTCCGAGGAACTTGCTCTCCGATTTGAACGTTAGGGTCGGATTGTAAACGCAGAGAAACTTGCAGATCTTTTCAACCCTAATTCTGAGATTTTAGAAGTGTCATTTTATGAAGCCTCCTTGGCTGCTTGCATTTTCTGCTGTTGAAAGAATTTAGCACGTAGGTTTTTAGAGTGAACGTCAATGATGGATGTTTCCGAGGTTGAAGAAAATCTGTTTGCAATAAGTGATGCCAAGTTACATGGAGAAATGTGCAAGTCTCTTTCAGCTATATATTGTAAAGTATTGTCAATATTTCCATCCTTGGAAGCAGCTAAGCCTAGGAGCAAATCTGGCATTCAGGCATTATGTTCATTGCATGTGGCCTTAGAGAAAGCAAAGAATGTTCTTCAGCATTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGGGATTCCGTTCTTCTGAAATTTGAGAAGGTTAAATGTGCACTTGAAGATAGTCTTAAGCGGGTGGAAGATATTGTTTCACAGTCAATTGGTTGTCAGATTCAAGGGATTGTAAATGAACTTAAAAGTTCAGCGTTTGCGCTTGACCCATTGGAGAAGCAAATTGGTGATAATTTAATTGCATTACTCCAGCAGGGAAGGAAATTCAGTGACTCTAATGATCGTAGTGAGCTTGAATGTTTTCACCTGGCTGCTACTAGACTTGGAATAACATCTTCTAGAGCAGCTCTTACTGAGCGGAGAGCTCTCAAGAAACTCATAGAAAGAGCTCGTAGTGAGGAAGACAAACGGAAGGAATCAATTGTTGCATATCTTTTACACCTTATGAGGAAATATTCCAAGTTATTTAGAAGTGATTTTTCGGATGATAATGACTCACAGGGTTCCGCACCTTGTTCTCCCACTGTGCAGGGATCTGTTGAGGATGCTATTCCTGTTGGTCATTGTCATGCCTTTGACAAACAGCTTTCAAAACTTAGTTCCTTTAATTTTAAGCCAAATAATGGGAAATCAGAGCAGATGCCACTTCCACCTGAAGAGTTGAGATGTCCAATATCTCTGCAACTTATGTATGATCCTGTTATCATTGCTTCTGGGCAAACATATGAAAGGGTTTGCATAGAAAAATGGTTCAGTGATGGGCACAACACCTGCCCAAAGACTCAACAGAAACTTTCACACCTTTCTTTGACTCCCAATCACTGCGTTAAGGGTCTTGTTGCTTGTTGGTGTGAACAGAATGGAGTTCCTGTTCCAGATGGCCCTCCTGAATCACTTGACTTTAACTATTGGAGACTGGCATTATCTGAATCTGAGTCAACAAATTCTAGATCTGTTAACAGTGTCAGTTCTTGTAAGTTGAAAGGTGTCAAAGTGGTTCCAATAGAAGAGAGTGGTATTTCGGAGGAAACTGCAGGAGATGGATCTGAGAGTGTGTCTGCACAAGAGGAAGATAACAAGCAGTATCTTAGTTTTCTGAAAATCTTGACTGAAGGGAACAATTGGAAGAGAAAATGTAAAGTGGTAGAACGGTTAAGGCTGTTACTAAGAGATGACGAAGAAGCCAGAACTTTTATGGGCGTTAATGGATTTATTGAAGCACTTCTGCAGTTTCTACAATCAGCAATGCATGAAGGGAATGTCATGTCTCAGGAAAGTGGAGCACTGGCTCTCTTCAACCTTGCTGTGAATAATAACAGAAACAAGGAAATTATGTTAGCAGAAGGAGTATTGCCATTGTTGGATGAAATGATTTCTAACTCCAGCTCTTATGGTTGTGCAACGGCCCTGTATCTGAATCTCTCTTGCCTTGAAGAAGCCAAGCCTGTGATTGGCATGAGTCAGGCTGTCCCGTTCCTAAATCAGATTCTTCAAGCTCACACTGAAATCCAATGCAGGCAAGATGCCCTCCATGCACTCTACAATCTCTCCACTGCTCCCTCCAATATTCCAAACCTCCTTTCGTCTGGCATCATTAGTGGCCTTCAATCCCTTCTTTCAGGCCAAGATTGCACGTGGACAGAAAAATGTATAGCTGTTTTGATAAATTTGGCTGCTTCTCAATTGGGAAAGGAGGAAATGATGTCAACTCCTGGACTAATAAGTGCATTGGCTGGGATATTAGACACTGGTGAGCTCCTAGAGCAGGAGCAAGCCGCCTCTTGTCTCTTGATTTTATGTAAGGGGAATGACAAATGTTGTCAGATGGTCCTCCAAGAAGGAGTAATACCTGCGTTAGTGTCAATGTCAGTGAATGGGACTTCAAGAGGAAGGGAAAAAGCTCAGAAACTCTTGATGCTGTTCCGGGAGCAGCGACAACGAGACCATTCACCTGCTAAGACGGGTCAGCGCTCACCTGAAACTAGTGATATATCTGTGCCTCCTCCAGAAACGAAACCACTGTGTAAATCAATGTCTAGAAGGAAGGTGGGGAAAGCTTTTAGCCTTTTGTGGAAAAGTAAGAGCTATTCTGTTTACCAGTGTTAAGATCCAATCCATGGGTTGTAAATCTGTATCTTGACTTTTGTTTCCCTGCTTTTATCCATCCTCCTCTCAAGGGTGCTTTCCTTTTTTCCTTTTGGTTTCCGAAGCGACGAAGAGATGTACAGGCCTGTGTAATTTATGGATTTTGTTTTCTTCTGTTGCCTTCCTCGTTGTAATATCAACCTCTCAAAAAGTGTTAGATTAAACCTTTTGAAGGTTGTTGACTAATGTGAATTTGCTAGTAAGAATTGTTAGGGATAGCATCCCC 2852 0.4148 MMDVSEVEENLFAISDAKLHGEMCKSLSAIYCKVLSIFPSLEAAKPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKVKCALEDSLKRVEDIVSQSIGCQIQGIVNELKSSAFALDPLEKQIGDNLIALLQQGRKFSDSNDRSELECFHLAATRLGITSSRAALTERRALKKLIERARSEEDKRKESIVAYLLHLMRKYSKLFRSDFSDDNDSQGSAPCSPTVQGSVEDAIPVGHCHAFDKQLSKLSSFNFKPNNGKSEQMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLSHLSLTPNHCVKGLVACWCEQNGVPVPDGPPESLDFNYWRLALSESESTNSRSVNSVSSCKLKGVKVVPIEESGISEETAGDGSESVSAQEEDNKQYLSFLKILTEGNNWKRKCKVVERLRLLLRDDEEARTFMGVNGFIEALLQFLQSAMHEGNVMSQESGALALFNLAVNNNRNKEIMLAEGVLPLLDEMISNSSSYGCATALYLNLSCLEEAKPVIGMSQAVPFLNQILQAHTEIQCRQDALHALYNLSTAPSNIPNLLSSGIISGLQSLLSGQDCTWTEKCIAVLINLAASQLGKEEMMSTPGLISALAGILDTGELLEQEQAASCLLILCKGNDKCCQMVLQEGVIPALVSMSVNGTSRGREKAQKLLMLFREQRQRDHSPAKTGQRSPETSDISVPPPETKPLCKSMSRRKVGKAFSLLWKSKSYSVYQC 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00036 764 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Bach5g00036 764 SUPERFAMILY RING/U-box 273 356 - -
Bach5g00036 764 PANTHER U BOX DOMAIN-CONTAINING 22 709 - -
Bach5g00036 764 MobiDBLite consensus disorder prediction 708 738 - -
Bach5g00036 764 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 466 512 IPR000225 GO:0005515
Bach5g00036 764 FunFam RING-type E3 ubiquitin transferase 279 353 - -
Bach5g00036 764 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Bach5g00036 764 Pfam U-box domain 281 350 IPR003613 GO:0004842|GO:0016567
Bach5g00036 764 SUPERFAMILY ARM repeat 428 706 IPR016024 -
Bach5g00036 764 Coils Coil 176 196 - -
Bach5g00036 764 Gene3D - 417 589 IPR011989 -
Bach5g00036 764 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 353 IPR013083 -
Bach5g00036 764 CDD RING-Ubox_PUB 281 333 IPR045210 -
Bach5g00036 764 Gene3D - 590 711 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00036 Bach-Chr5 285512 291136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00036 2 763 U-box Gene Family AT1G24330 66.067 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00036 - - gmx:100804344 1215.68