Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00024 ATGTATTTATCAGAAAAACCTCGTCCTATCGATTTCTACAAAGAAGAAGGTAGCCGAGACATGATTATAGAGGTTGTCTCAAATGGCGAACTAGCACCACCGCACCAACAAGCTGCTCAGCTTCAAATGATCGTGGGTGATAGCAGCGGGGAAGAGCATGAGGTTGAGATTAAGGCACCCAAGAAGCGTGCTGAAACTTGGGTACAGGACGAGACACGAAGCTTGATTGCCCTTCGTCGCGAGATGGATGCTCTATTTAACACTTCCAAATCCAACAAACACTTGTGGGAACAAATATCAGCCAAGATGAGAGAGAAGGGATTCGATCGCTCCCCAACTATGTGCACAGACAAATGGAGAAATTTGTTAAAGGAGTTCAAGAAGGCTAAGCACCAAGATAGGGGAAGTGCGTCTGCCAAGATGTCCTATTACAAGGAGATTGAAGAGATTCTCAGAGATAGGAGTAAGAGTGTACAGTACAAGAGCCCTACTCCTCCGAAGGTTGATTCCTTTATGCAATTCGCGGATAAAGGTATTGAGGATACTAGCATCTCTTTTGGGCCAGTTGAAGCTACAGGCAGACCAACACTCAATCTTGAGAGACGTCTTGATCGTGATGGACATCCTCTTTCCATCACTGCAGCTGAAGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACCCCTGGAAGTGGTGGGGAGGGTCAAACATGTTGTGGGAGAGTTATATCAGTCAAATGGGGTGATTATACCCGGAGAATAGGCATTGATGGCACTTCAGAAGCCATCAAGGAGGCAATAAAGGTTACTTTTAGGTTGAGAACCAAACGTGCATTTTGGTTGGAAGATGAAGACCAGATAATCAGAAGTTTTGACCGTGACATGCCTTTAGGGAATTACACTCTTCACCTTGATGAAGGAATGGCGATTAAAGTATGCCTTTATGATGAGTCTGACCACATCCCTGTGCATACTGAAGACAAGATATTTTACACTGAAGATGATTACCGTGATTTTCTAACACACCGTGGCTGGACATGTCTAAGGGAAATTGATGGCTATAGAAACATTGATAATATGGATGATCTTCGACCTGGTGCCATGTACCGTGGTGTGAGTTGAGGCTAGATGTTTGCACGGCATGATCAACCTACAGCTCTTCGCTTAAAATGCCTAGAAAATTGTTGAGGGGATTGTTTATATCTTGGCAGATGTGCTGCACTAACCTGGAGGTGTATTTACGTAGTTTTAAAGGTCTTCATGATCCATGATAGGAAAATGGATATGAAGACATGGACTTTAAATGTCTGTAAATATGCATTTTCA 1335 0.4367 MYLSEKPRPIDFYKEEGSRDMIIEVVSNGELAPPHQQAAQLQMIVGDSSGEEHEVEIKAPKKRAETWVQDETRSLIALRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSASAKMSYYKEIEEILRDRSKSVQYKSPTPPKVDSFMQFADKGIEDTSISFGPVEATGRPTLNLERRLDRDGHPLSITAAEAVAASGVPPWNWRETPGSGGEGQTCCGRVISVKWGDYTRRIGIDGTSEAIKEAIKVTFRLRTKRAFWLEDEDQIIRSFDRDMPLGNYTLHLDEGMAIKVCLYDESDHIPVHTEDKIFYTEDDYRDFLTHRGWTCLREIDGYRNIDNMDDLRPGAMYRGVS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00024 376 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Bach5g00024 376 SMART sant 63 125 IPR001005 -
Bach5g00024 376 CDD GT1 65 130 - -
Bach5g00024 376 Gene3D - 67 129 - -
Bach5g00024 376 FunFam trihelix transcription factor GT-1 67 129 - -
Bach5g00024 376 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
Bach5g00024 376 PANTHER FI21293P1 46 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00024 Bach-Chr5 209926 213604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00024 1 375 Trihelix Transcription Factor Family AT3G25990 67.268 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bach5g00024 Myb_DNA-bind_4 3.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00024 - - qsa:O6P43_023896 692.575