Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00019 ATGGACAATGGTCTCTCTTCTCCTCGGCGCGATGCTTTCCCTGCTGGTCTGCGGGTTCTCGTCGTTGACGATGATCCAACATGGCTTAAGATCCTTGAAAAGATGCTCAAGAAGTGCTCTTACGAAGTGACTACATGTTGTCTAGCAAGAGAGGCTCTAAACTTGCTTCGTGAAAGGAAAGATGGGTATGACATTGTGATCAGCGATGTAAACATGCCTGACATGGACGGCTTTAAACTTCTCGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACAAGTAGGGTAATGAAAGGTGTTCAACATGGGGCATGTGATTATCTCCTTAAGCCCATAAGAATGAAAGAACTGCGTAATATATGGCAACATGTCTTTAGGAAAAGGATACACGAGGCAAGAGAATTTGAAAGTCTTGATGGCTTCGAAGGCATTCACTTGATGAGAAATGAATTTGATCACTCTGATGATGGCAACTTGTTCGCTCTGGAAGATATGACCTCCCTAAAGAAAAGAAAAGATGCAGGTAACAAACATGATGACAAAGAATATGGAGATTCATCTTCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGACCTCCACCAGAAATTTGTTAAAGCTGTGAATCAGATAGGATTTGATAAAGTTGGTCCAAAGAAAATACTCGATCTGATGAATGTTCCATGGCTGAGTAGAGAAAATGTTGCTAGCCATTTGCAGAAATATCGGCTCTACTTGAGCAGGTTGCAGAAGGAAAATGATCAGAAATCTTCATCATGTGGGCTGAAGCTTTCAGATTTACTATCGAAAGATCCTCTAGGAAGTTTTGGTTTTCAGAACTCAATAAACAGGCAGCAAAATGATGTTAAATTTGACGGCTTCAAATTTTCAGAAGGTACAGTAAAACCACAGAATGTGGATGCTAAAAGTCATGACAGTGATCTCAAGGGGATTTCAGAGTCCACAAGTGAAAAAAGAAGAGCTTTGACCACTAACGTTCCTGATAAAAAACCAAGGAGGAGTTCGGAGATGGGTGTTAATAATTCTCTTACAGATTTGGAATCAGAAGGTAAGCGTCAGGTATTTGGTTGCACCATCCCAACACGATATGCTTGGAGTGAAGTTCCGGAAATGCAACTCAAACAAGAAAACAAGTCACTTCTTCATTTAGAAGATAGCTTCAGCCAGTTGCCACTACACGGTACACAGCATCACATCCAGGTTAATCAATCGCAATCAATTACTTCGATTAGTTCCAATCACTCTATAACAGAGGGGGAGATTGCTGGTTGTGTTGAAACTAAGCCTTTGAATGCTGATTGCAAGAGTGATTATGCCGGTTCTGCGAGTTCAATAGGGAGTGCAGTTGACACCTTGTCAATTCAATCCAAGAGCCATACAGTAAATGGTTTTCCTGATCCAGAATTTTATCAAAGAAACCTACTTTTGGGAGGTGAGGTAGCTTCTGCACCTTTGGACGAGGACTTGCACTTCTTTTGGCTACAAGGTGAATATTATAATGTGAATTTGGGGCTGCAGAATATAGAGACGTCAGAGTATTATGATGCAGGGCTCATTGCAGAAGTTCCAGCTCACTTATATGATTCGGCAGATTATTCGGTCGTAGATCAAGGCCTATTTATAGCATGATCTGCTCTGCCCTTTCGTGTATTTTCAACAAAAGATCCACTCATAATTTATGTTTCTTGTGGGTAGCTACATATATTGTTGAGGAGTTTCAACTTTTAAGGGCTTTCTGTCTGGAAGTTATTAAATGTTCATCTGTACCAAGGGTAAAAAAG 1826 0.4074 MDNGLSSPRRDAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESLDGFEGIHLMRNEFDHSDDGNLFALEDMTSLKKRKDAGNKHDDKEYGDSSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASHLQKYRLYLSRLQKENDQKSSSCGLKLSDLLSKDPLGSFGFQNSINRQQNDVKFDGFKFSEGTVKPQNVDAKSHDSDLKGISESTSEKRRALTTNVPDKKPRRSSEMGVNNSLTDLESEGKRQVFGCTIPTRYAWSEVPEMQLKQENKSLLHLEDSFSQLPLHGTQHHIQVNQSQSITSISSNHSITEGEIAGCVETKPLNADCKSDYAGSASSIGSAVDTLSIQSKSHTVNGFPDPEFYQRNLLLGGEVASAPLDEDLHFFWLQGEYYNVNLGLQNIETSEYYDAGLIAEVPAHLYDSADYSVVDQGLFIA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00019 557 FunFam Two-component response regulator 195 258 - -
Bach5g00019 557 MobiDBLite consensus disorder prediction 310 360 - -
Bach5g00019 557 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Bach5g00019 557 MobiDBLite consensus disorder prediction 313 350 - -
Bach5g00019 557 FunFam Two-component response regulator 17 152 - -
Bach5g00019 557 Pfam Myb-like DNA-binding domain 201 251 IPR001005 -
Bach5g00019 557 Gene3D - 17 183 - -
Bach5g00019 557 CDD REC_typeB_ARR-like 19 133 - -
Bach5g00019 557 SMART REC_2 17 129 IPR001789 GO:0000160
Bach5g00019 557 SUPERFAMILY CheY-like 16 146 IPR011006 -
Bach5g00019 557 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Bach5g00019 557 PIRSF RR_ARR_type-B 1 530 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bach5g00019 557 Gene3D - 195 258 - -
Bach5g00019 557 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Bach5g00019 557 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 326 IPR045279 GO:0009736
Bach5g00019 557 SUPERFAMILY Homeodomain-like 197 256 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00019 Bach-Chr5 175314 179079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00019 11 265 Response Regulator Gene Family AT2G25180 55.344 2.29e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bach5g00019 Response_reg 7.3e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00019 K14491 - gmx:100797421 774.622