Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00005 ATGGAGGAAGCAATGGCAGCAAGGTATTGGTGTCACATGTGCTCTCAAATGGTAAATCCCATCATGGAAGTGGAGATCAAATGCCCATTTTGCTTAAGTGGATTTGTTGAAGAAATGAGTAGCACCACTTCCACTGGCGACAATGACAATAACGCAGAAGCTGATTTTGGATCCGATCGAGCCCTCTCCCTATGGGCCCCAATCTTGCTTGGCATGATGGGCAATCCACGTCATCAACGAAGACTCAGACGAAGGGATCTTGGAGATGATGATGATGATAATGATGCCCATGGCAATGATGGTAGTGAAGCCCGCCATGGTAGAGAAACTGAATATGATCAAGAGCTTGAGTCCATTCTTCGGAGGAGGAGGAGAAGAAGCTCAGCTGCCATTCTACAATTGTTGAGAGGCATAAGAGCTGGATTGGCATCTGAATCATATGAGAATTCTGAAGGTGGTGATGGTAACAGGGAAAGAGAAAGAGAACGTGTAATCTTGATTAACCCTTTTAATCAGACAATCATTGTCCAAGGTTCCTATGATTCAAACCGGGGTGAGAATGATAACCGTAACCCCATTGGGTCTCTGGGTGACTATTTCATAGGACCTGGATTGGATTTATTGCTGCAACATTTGGCAGAAAATGATCCGAACAGATATGGAACACCACCTGCACAGAAGGAGGCAGTTGAAGCACTGCCAACTGTGATAATCAATGAAAATTTGCAGTGTTCTGTCTGTTTGGATGATTTTGAACTTGGTTCTGAAGCCAAGGAGATGCCCTGTAAACATAGGTTTCATAGTGGGTGTATCCTGCCCTGGTTGGAGCTTCATAGTTCATGTCCAGTGTGTAGGTTTCAATTGCCTAAGGATGAATCCAAACGAGACTCCGAAGCATCTAGGAATAATAGCAGCAATAACCAAAGGGATAATGACGATGCTGTTCTTGCGCAACATGGCAGAGAGAACGGTGAAGATGGAGAAGTTGAAGGGAGAAATGCAAATGGGCTTAGAAGATTATTTCCATGGCTTTTCAATGGATTATTTTCTTCTTCAAACTCTTCATCTTCAACTAGTTCTAATGCAAACGGAACTGGTACTCAAACCGATGACAATTGA 1119 0.4361 MEEAMAARYWCHMCSQMVNPIMEVEIKCPFCLSGFVEEMSSTTSTGDNDNNAEADFGSDRALSLWAPILLGMMGNPRHQRRLRRRDLGDDDDDNDAHGNDGSEARHGRETEYDQELESILRRRRRRSSAAILQLLRGIRAGLASESYENSEGGDGNRERERERVILINPFNQTIIVQGSYDSNRGENDNRNPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVIINENLQCSVCLDDFELGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRFQLPKDESKRDSEASRNNSSNNQRDNDDAVLAQHGRENGEDGEVEGRNANGLRRLFPWLFNGLFSSSNSSSSTSSNANGTGTQTDDN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00005 372 FunFam E3 ubiquitin-protein ligase RING1-like 211 291 - -
Bach5g00005 372 MobiDBLite consensus disorder prediction 292 313 - -
Bach5g00005 372 ProSiteProfiles Zinc finger RING-type profile. 244 285 IPR001841 -
Bach5g00005 372 Pfam Ring finger domain 243 285 IPR001841 -
Bach5g00005 372 CDD RING-H2_RNF126-like 243 285 - -
Bach5g00005 372 MobiDBLite consensus disorder prediction 351 372 - -
Bach5g00005 372 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 211 291 IPR013083 -
Bach5g00005 372 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 126 289 - -
Bach5g00005 372 MobiDBLite consensus disorder prediction 85 113 - -
Bach5g00005 372 SUPERFAMILY RING/U-box 232 291 - -
Bach5g00005 372 Pfam zinc-ribbon 8 39 IPR039525 GO:0061630
Bach5g00005 372 SMART ring_2 244 284 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00005 Bach-Chr5 65689 66807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00005 108 291 C3H Transcription Factor Family AT1G26800 36.364 4.93e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00005 - K11982 twl:119993083 484.567