Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach5g00001 | ATGTGGTTTCCTAGGTGTCACGAAACTGAACAAAAGCGTGAAGAAAGAGAAAGGCATCCTATTAATCAGAGGGAAAAACACGCCCTTTATCCAGTTGAAATAACTGATGTAACAGTTGATACAAAGGACAGAGATGAGATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCATTTTTGAGCCTCTGCCAGGGTAATCATTATCAGTATGATACACTCAGGCGGGCCAAGCATTCCTCAATGATGGTCCTTTATCATCTCCATAATCCAATTGCTCCTGCGTTTGTCACAACTTGTAACATATGCCATCTTGACATAGAAACTGGTCAAGGTTGGCGGTGTGAAGTTTGCCCTGATTATGATGTATGCAATGCTTGTTATCAAAAAGATGGAGGCAATGATCATCCTCATAAGTTGACTAATCATCCGTCAATGGCTGACCGTGATGCTCAGAACAAAGAAGCTAGGCAATTTCGTGTATTGCAGCTACGCAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGCCGCAAGGTGAAGGGGCTTTTCCGGCATGGGATACAATGCAAAACACGTGCCTCTGGAGGCTGTGTTCTTTGTAAGAAAATGTGGTATTTGCTTCAACTCCATGCTCGTGCTTGCAAAGAATCTGAGTGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTACGGAGGTTGCAGCAGCAGTCTGACTCACGGCGAAGAGCAGCGGTGATGGAGATGATGAGACAGAGAGCTGCAGAAGTTGCCAACAATGCCGGATGA | 819 | 0.442 | MWFPRCHETEQKREERERHPINQREKHALYPVEITDVTVDTKDRDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPIAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGNDHPHKLTNHPSMADRDAQNKEARQFRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG | 272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach5g00001 | 272 | Pfam | TAZ zinc finger | 164 | 234 | IPR000197 | - | |
| Bach5g00001 | 272 | ProSiteProfiles | Zinc finger ZZ-type profile. | 94 | 147 | IPR000433 | GO:0008270 | |
| Bach5g00001 | 272 | PANTHER | CBP/P300-RELATED | 12 | 263 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
| Bach5g00001 | 272 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Bach5g00001 | 272 | Pfam | Zinc finger, ZZ type | 96 | 137 | IPR000433 | GO:0008270 | |
| Bach5g00001 | 272 | SMART | zz_5 | 93 | 139 | IPR000433 | GO:0008270 | |
| Bach5g00001 | 272 | FunFam | Histone acetyltransferase HAC1 | 93 | 144 | - | - | |
| Bach5g00001 | 272 | Gene3D | - | 93 | 145 | IPR043145 | - | |
| Bach5g00001 | 272 | SUPERFAMILY | RING/U-box | 75 | 143 | - | - | |
| Bach5g00001 | 272 | ProSiteProfiles | Zinc finger TAZ-type profile. | 154 | 237 | IPR000197 | - | |
| Bach5g00001 | 272 | SUPERFAMILY | TAZ domain | 156 | 239 | IPR035898 | - | |
| Bach5g00001 | 272 | ProSiteProfiles | CBP/p300-type histone acetyltransferase (HAT) domain profile. | 1 | 92 | IPR031162 | GO:0004402 | |
| Bach5g00001 | 272 | SMART | TAZ_2 | 157 | 235 | IPR000197 | - | |
| Bach5g00001 | 272 | Gene3D | TAZ domain | 151 | 268 | IPR035898 | - | |
| Bach5g00001 | 272 | ProSitePatterns | Zinc finger ZZ-type signature. | 99 | 126 | IPR000433 | GO:0008270 | |
| Bach5g00001 | 272 | FunFam | Histone acetyltransferase HAC1-like protein | 151 | 268 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach5g00001 | Bach-Chr5 | 15987 | 17176 | Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | TAZ | Bach5g00001 | zf-TAZ | 3.2e-14 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach5g00001 | K04498 | - | jre:109021274 | 537.339 |