Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02160 GTGAGGAGAATTGGACACTGATGCAGACACCTGTCAGAATTTGGTAAAGAAGAAAACGAAGGGTGTGCCATTGTTAATTTGCTTCTATCAGCTGCAATGGCGGGTAAAAGACCAGCTAAGACAAACCCATCACTGGCTAGGAAGAGGGTTGAAGCCGTTGATTCCAATTCTGCTTCTGCTCTTGTTCGCGGTAAAGACGGCAGTGCTTTTGCTCGATGTGATGAATGTAGCAAAGATGTTCCAGTTGCGCTCATCAGTATGCACAGTTGCAGTCTCGAAGCTAAAATTAAAATGAACCTAGAGGCTCAGGTAGTTGAAAAGCCTACTGAAGTCAAAAAGCCAGCAGAGAGAAAGAAAGCAAAATCAACAGAGCCCAAGGCCAAAAGAGCTAAAGTTGAGAAGGGGAAGAAGGATCCTAATGCACCCAAGCGTCCTGTCACTTCCTTTTTTATCTTCCTGGAAGAGTTTAGAAAAGAGTACAAGGAAGCAAATCCGGATGCAAAGGGTGTTAAAGGGGTTGCTAAAGAAGCTGGTGAGAAGTGGAAATCCATGACTGATGAGGATAAGAAACCTTATCATGATAAAGCTGCTGAGCTTAAGGCAGAGTACGAAAAGGCTATAGCATCTTATAATGCTGAAGATGAAGATCAAGAGGTTGATGAAGGGTCTGACAAGGAAGCTGCGGTAAAGGAAGTGGAAAAGGGTGAGGAGGAATCTGACAAGGGAGCTGCGACGAATGAATTGGAAGAAGTCTCTGATGAGTAA 765 0.4418 MAGKRPAKTNPSLARKRVEAVDSNSASALVRGKDGSAFARCDECSKDVPVALISMHSCSLEAKIKMNLEAQVVEKPTEVKKPAERKKAKSTEPKAKRAKVEKGKKDPNAPKRPVTSFFIFLEEFRKEYKEANPDAKGVKGVAKEAGEKWKSMTDEDKKPYHDKAAELKAEYEKAIASYNAEDEDQEVDEGSDKEAAVKEVEKGEEESDKGAATNELEEVSDE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02160 222 CDD HMG-box_AtHMGB1-like 111 171 - -
Bach4g02160 222 SMART hmgende2 109 180 IPR009071 -
Bach4g02160 222 MobiDBLite consensus disorder prediction 134 180 - -
Bach4g02160 222 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 110 179 IPR009071 -
Bach4g02160 222 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 14 201 - -
Bach4g02160 222 MobiDBLite consensus disorder prediction 191 216 - -
Bach4g02160 222 MobiDBLite consensus disorder prediction 134 222 - -
Bach4g02160 222 MobiDBLite consensus disorder prediction 1 26 - -
Bach4g02160 222 SUPERFAMILY HMG-box 98 179 IPR036910 -
Bach4g02160 222 Coils Coil 161 184 - -
Bach4g02160 222 Gene3D High mobility group box domain 96 179 IPR036910 -
Bach4g02160 222 MobiDBLite consensus disorder prediction 73 112 - -
Bach4g02160 222 MobiDBLite consensus disorder prediction 74 109 - -
Bach4g02160 222 Pfam HMG (high mobility group) box 110 179 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02160 Bach-Chr4 29905014 29908184 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bach4g02160 HMG_box 8.1e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g02160 K25507 - qsa:O6P43_026184 271.552