Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02153 ATGGACGACGGTGGAGAAACAGAGGAACCGGGGACCGAAGGAGAAAAATCAGAGGCAGAGCTGGCTTGGCTTGACGCTGGGGAAGAAATCAAAGGGGTAGCCGACAATCAAATTGAGGTCAATGAGGTGAGTAAGGAGATGGATTTAGATCTAATCAAGCAAAACAGTCAGGTGGAGAGGGTAATTGCATGTAGGATTAGCAGAGATAACTCTGACAATGTCATTCTTGAATACCTAGTCAAATGGCAAGGACTATCCTATGCAGAAGCAACATGGGAGAAGGATGTTGATATTGCTTTTGCTCAACATGCCATTGACGAGTATAAGGCTCGTGAGGCTGCTATGTCAGTTCAACGAAAGATGGTAGATCCCCAGCGCAAGAAGAGCAAAGCAATTTTGTGGAAGCTTGATGAACAGCCTGAATGGTTGAAGGGTGGAAGGCTCTGTGATTATCAACTTGAGGGTTTGAATTTTCTTGTTAACAGTTGGAAAAATGATACAGATGTCATTTTAGCTGATGAAATGGGTCTTGGGAAAACTGTCCAGTCGAATAGCGTTGAGAAGCTATGGGCTTTGCTTCACTTCCTTGATCCTGATAAGTTTAAGAGCAAGGATGACTCGGTTCAAAACTACAAGAATCTAAGTTCATTCAATGAAAATGAGCTTGCTGATCTTCATATGGAATTGAGTGCTGACCATGGTTATGGTGGGGACTCAGGAAGTAGTGACAGCAGTAAGGTGGAGAGAATTGTCTTTAGCAGTGGGAAGCTTGTCATACTTGATAAGCTGTTGGTTCGATTGCATGAGACAAAGCATCGTGTTCTGATTTTCTCTCAGATGGTCGGGATGTTGGATATGCTGGCAGACTATATGTCACTTAGAGGGTACCAATTCCAGAGGCTTGATGGCAGTACAAAGGCTGAGTTGCGGCAGCAGGCTATGGACCATTTTAATGCACCTGATAGTGATGATTTCTGCTTCCTCCTTTCAACACGAGCAGGGGGTCTTGGTATAAACCTTGCCACAACAGACATTGTTATAATATTTGATTCGGACTGGAATCCCCAAAATGACCTACAGGCCATGAGTAGAGCTCATAGAATTGGGCAACAAGAAGTTGTAAACATTTATAGATTTGTAACAAGCAAAAGTGTAGAGGAAGGTATTTTGGAACGAGCTAAGAAGAAAATGGTTCTTGATCATTTGGTGATTCAAAAATTAAATGCAGAGGGTAGACTGGAGAAGAAAGAAGCCCAAAAAGGAAGTTATTTTGACAAAAATGAGCTATCAACAATCTTAAGATTTGGAGTGGAAGAGCTTTTTAAAGAGGAGAAACATGATGAAGAAAGCAAGAAACGACTCTTAAGTATGGATATAGATGAGACACTTGAAAGAGTAGAGAAGGTTGAGGAGGAGGAAGATGAGGGAGAACAAGCGCATGAGTTGTTGAGTGCCTTTAAGGTTGCTAATTTCACTAATGGTGAGAACGATGGAAGTTTTTGGAGTCGTTGGATAAAACCTGAAGCAGTGACCCAAGCTGAAGAAGCCCTTGCTCCTCGTGTTGCAAGGAATATTAAAAGTTATGCAGAGGCTAATCAATCTGGAAGAGCAGAGGTCAATCTATCTGGAAGAAGTAGTAAAAGAAAAAAAAAAGAAAGGACTTGA 1665 0.4186 MDDGGETEEPGTEGEKSEAELAWLDAGEEIKGVADNQIEVNEVSKEMDLDLIKQNSQVERVIACRISRDNSDNVILEYLVKWQGLSYAEATWEKDVDIAFAQHAIDEYKAREAAMSVQRKMVDPQRKKSKAILWKLDEQPEWLKGGRLCDYQLEGLNFLVNSWKNDTDVILADEMGLGKTVQSNSVEKLWALLHFLDPDKFKSKDDSVQNYKNLSSFNENELADLHMELSADHGYGGDSGSSDSSKVERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVGMLDMLADYMSLRGYQFQRLDGSTKAELRQQAMDHFNAPDSDDFCFLLSTRAGGLGINLATTDIVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEGILERAKKKMVLDHLVIQKLNAEGRLEKKEAQKGSYFDKNELSTILRFGVEELFKEEKHDEESKKRLLSMDIDETLERVEKVEEEEDEGEQAHELLSAFKVANFTNGENDGSFWSRWIKPEAVTQAEEALAPRVARNIKSYAEANQSGRAEVNLSGRSSKRKKKERT 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02153 554 SUPERFAMILY Chromo domain-like 37 111 IPR016197 -
Bach4g02153 554 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 238 548 - -
Bach4g02153 554 Coils Coil 399 419 - -
Bach4g02153 554 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 259 410 IPR001650 -
Bach4g02153 554 SMART helicmild6 285 369 IPR001650 -
Bach4g02153 554 CDD CD2_tandem 54 110 - -
Bach4g02153 554 Gene3D - 41 111 - -
Bach4g02153 554 MobiDBLite consensus disorder prediction 532 554 - -
Bach4g02153 554 Gene3D - 115 185 IPR038718 -
Bach4g02153 554 CDD SF2_C_SNF 246 380 - -
Bach4g02153 554 SMART chromo_7 54 113 IPR000953 -
Bach4g02153 554 ProSiteProfiles Chromo and chromo shadow domain profile. 56 120 IPR000953 -
Bach4g02153 554 Coils Coil 452 479 - -
Bach4g02153 554 Pfam Chromo (CHRromatin Organisation MOdifier) domain 57 111 IPR023780 -
Bach4g02153 554 Pfam Helicase conserved C-terminal domain 256 369 IPR001650 -
Bach4g02153 554 Gene3D - 195 482 IPR027417 -
Bach4g02153 554 FunFam protein CHROMATIN REMODELING 5 isoform X2 58 110 - -
Bach4g02153 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02153 Bach-Chr4 29846911 29849194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g02153 247 414 RAD5 or RAD16-like Gene Family AT5G22750 32.941 2.29e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g02153 K11367 - gmx:100808039 495.738