Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02119 ATGGCAGAAATAACGGAACAGCCCCTTTCCGACACCGACGCACCGCAGTACTGGTGCTACCAATGCAACAAACGGGTCTCCATCGAAACGCAGGATAGTCGACCCGACATTACCTGCCTCGAATGCAAGAACGGCTTCGTTGAATCCATTCCTTCCACTTCTTCGCAGTCATCCGTTCCATCTTCTGGCTATTCTAATCACGTCGATGATCCGTATTCCGGGTCGCAATTTCTGGAGGCGCTTCGGCTACTCGCGCAATCGGCGCGTGATGATGACGCTTCACCTCCGCCACCTCCTAACCGTGTTTCTGGAGGCGATTATCTCAGGATTGAGCTCGGTGGGTGGGATCACGATGAGGAAGATGACGACGACGACGACGACGACGAAGACGATGTGGAGTTTCATAACGAAGGAGAAGAGCAGGAAGATATTGAAGAACCGCAGGATCGACCCGTAAATGAGGACCATCATGGGGACGACGAAGATCTGCGGCGTAGGAGACGTGATGTGCTGCGACTTCGGATCAGAGATTTGGCGACTCGCACGCGGAGCATGAGGAACCGGATCTTGGATTGGGCTGAGATATTGATGGGTCTGGAAGATAATTCCGTAGAGTTTCGGCTTCAAGGGCCGGAATCGGATCGGTATGTGGGAAACCCAGAAGACTACGTTGATGCAGCTGAGTATGAAGCTTTGCTACAGACATTGGTGGAGAGCGACGGAGGAGGGAGGAGAGGAGCCCCACCAGCGGCAAAGTCAGCGGTGGATGCATTACCAACAGTGAAGATTGTGTCAGAGGATGAGGCTTTGGTCTGTGCTATTTGTAAGGATTTGGTGGGTGTTGGAGATATGTCAAGGAGATTGCCTTGTGGGCATCAGTACCATGGAGGTTGCATAATTCCATGGTTGGGCTCTAGAAATTCATGCCCAGTATGCAGGTTTGAGCTGCCAACAGATGACCATGAATATGAGGAGGAAAAGAGTGAGAGGGTCACAGTCACTGCCGGTGGGGCATCGGGTTCCGGTGGTACTGACACGGGGTCTGGTTGA 1050 0.5276 MAEITEQPLSDTDAPQYWCYQCNKRVSIETQDSRPDITCLECKNGFVESIPSTSSQSSVPSSGYSNHVDDPYSGSQFLEALRLLAQSARDDDASPPPPPNRVSGGDYLRIELGGWDHDEEDDDDDDDDEDDVEFHNEGEEQEDIEEPQDRPVNEDHHGDDEDLRRRRRDVLRLRIRDLATRTRSMRNRILDWAEILMGLEDNSVEFRLQGPESDRYVGNPEDYVDAAEYEALLQTLVESDGGGRRGAPPAAKSAVDALPTVKIVSEDEALVCAICKDLVGVGDMSRRLPCGHQYHGGCIIPWLGSRNSCPVCRFELPTDDHEYEEEKSERVTVTAGGASGSGGTDTGSG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02119 349 CDD RING-H2_PA-TM-RING 271 313 - -
Bach4g02119 349 MobiDBLite consensus disorder prediction 323 349 - -
Bach4g02119 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 319 IPR013083 -
Bach4g02119 349 ProSiteProfiles Zinc finger RING-type profile. 272 313 IPR001841 -
Bach4g02119 349 MobiDBLite consensus disorder prediction 116 148 - -
Bach4g02119 349 FunFam E3 ubiquitin-protein ligase RING1-like 236 319 - -
Bach4g02119 349 MobiDBLite consensus disorder prediction 149 163 - -
Bach4g02119 349 MobiDBLite consensus disorder prediction 334 349 - -
Bach4g02119 349 SMART ring_2 272 312 IPR001841 -
Bach4g02119 349 Pfam zinc-ribbon 16 50 IPR039525 GO:0061630
Bach4g02119 349 MobiDBLite consensus disorder prediction 48 72 - -
Bach4g02119 349 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 123 317 - -
Bach4g02119 349 Pfam Ring finger domain 272 313 IPR001841 -
Bach4g02119 349 SUPERFAMILY RING/U-box 266 319 - -
Bach4g02119 349 MobiDBLite consensus disorder prediction 88 107 - -
Bach4g02119 349 MobiDBLite consensus disorder prediction 115 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02119 Bach-Chr4 29263222 29264271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g02119 183 347 C3H Transcription Factor Family AT5G01980 44.767 1.85e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g02119 - - gmx:100780991 417.157