Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02088 ATGAGTGCATTCTCTCTGAATTTTCTTTTGCATGTTCTGCTTCTTGCTTCTTTAGCCAGAGAAGCTATCTGTGCATCAAAATCGACCGCGGCGAATAACGTTGAGATTTTAGCAGAGCAAGAAGCTGACCGAGTGGTTGGACTGCCGGGGCAGCCTCCGGTGAAGTTCAAGCAATACGCAGGTTATATCACAGTCAATGAGACTCATGGGAGAGCATTGTTCTATTGGTTCTTTGAGGCCCAAGAGAATCCACAAGAAAAACCTCTCCTCCTATGGCTCAATGGAGGCCCCGGATGTTCCTCAATTGGCTATGGACAAGCAGAAGAGCTAGGACCCTTCTTCCCCCAAAACAGCACTGAACCAAAACTAAAGTTGAACCCTTATGCTTGGAACAAAGCTGCAAATTTGCTGTTTCTTGAATCCCCTGTTGGAGTGGGATTTTCCTATACCAACACCAGCAGTGATATCAATAAGCTTGGTGACACTATCACTGCTAAGGATTCACATTCTTTCATTGTAAAATGGTTTCAGCGTTTTCCACAATTCAAGTCCCATGAGTTCTACATTGCTGGTGAAAGCTATGCAGGGCACTATGTTCCCCAACTATCAGAGCTTATCTTTGACAATAATCATAACCCTGCCAAGAAAGACTACATTAACTTCAAAGGGTTCATGATTGGGAATGCATTGTTGGATGATGAAACAGACCAAAAGGGAATGATAGATTATGCATGGGATCATGCTGTGATTTCTGATGGCTTATATGAAAAAATCAAGAAAAGCTGCAACTTCAGCGTTTCAAATCAAACAAAAGAATGCAATGCAGAACTCAACAAGTACTTTGATGTCTACAAGATTATTGACATGTATAGCTTGTATGCTCCCAAGTGTACCAGCGATGGCAACAGCACCAGACCAAGGAAACGCCCTGTTATCAATGGCGTAGCTCCCCATTCATTTTCCAAATTTGATGGATGGCATCAGAGACCTGGAGCTGGATATGATCCTTGTGCATCTGATTATACTGAAGTGTACCTGAATAGGCCAGAAGTCCAAAAGGCATTGCATGCCAATATTACAAAAATACCATATCCATGGAGTCATTGCAGTGATAATATCACATTTTGGAAGGATGCGCCCTCATCGATGCTTCCTGTTCTCAAGAAGCTTGTCGCGGGGGGTCTTCGCGTTTGGGTTTACAGTGGAGATACCGATGGAAGAATCCCTGTAAGTGGGACAAGATACACACTCAGAAAACTTGGACTCACTATTGTTGATGATTGGACCCCATGGTATACCAGCAAGCAGGTAGGAGGTTGGACTGTTGTATACGATGGACTCACATATGTGACCATTAGAGGTGCTGGCCATCAGGTTCCTACTTTTGCTCCCAAGCAAGCTTTTCAGCTACTTCGACACTTCTTGCTCAATAAAAAATTGCCACATCGACCAATTTAA 1458 0.4342 MSAFSLNFLLHVLLLASLAREAICASKSTAANNVEILAEQEADRVVGLPGQPPVKFKQYAGYITVNETHGRALFYWFFEAQENPQEKPLLLWLNGGPGCSSIGYGQAEELGPFFPQNSTEPKLKLNPYAWNKAANLLFLESPVGVGFSYTNTSSDINKLGDTITAKDSHSFIVKWFQRFPQFKSHEFYIAGESYAGHYVPQLSELIFDNNHNPAKKDYINFKGFMIGNALLDDETDQKGMIDYAWDHAVISDGLYEKIKKSCNFSVSNQTKECNAELNKYFDVYKIIDMYSLYAPKCTSDGNSTRPRKRPVINGVAPHSFSKFDGWHQRPGAGYDPCASDYTEVYLNRPEVQKALHANITKIPYPWSHCSDNITFWKDAPSSMLPVLKKLVAGGLRVWVYSGDTDGRIPVSGTRYTLRKLGLTIVDDWTPWYTSKQVGGWTVVYDGLTYVTIRGAGHQVPTFAPKQAFQLLRHFLLNKKLPHRPI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02088 485 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Bach4g02088 485 FunFam Carboxypeptidase 383 477 - -
Bach4g02088 485 FunFam Carboxypeptidase 333 480 - -
Bach4g02088 485 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Bach4g02088 485 Gene3D - 383 476 - -
Bach4g02088 485 FunFam Carboxypeptidase 39 299 - -
Bach4g02088 485 Gene3D alpha/beta hydrolase 39 299 IPR029058 -
Bach4g02088 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Bach4g02088 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Bach4g02088 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Bach4g02088 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Bach4g02088 485 Pfam Serine carboxypeptidase 49 476 IPR001563 GO:0004185|GO:0006508
Bach4g02088 485 Gene3D - 337 374 - -
Bach4g02088 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 464 IPR001563 GO:0004185|GO:0006508
Bach4g02088 485 SUPERFAMILY alpha/beta-Hydrolases 40 480 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02088 Bach-Chr4 28843873 28851867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g02088 345 480 Calmodulin-binding Proteins AT2G22960 32.117 1.46e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g02088 K16297 - gmx:100797264 807.364