Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02047 ATGCTTGATTCAATTGTTTTTTTGGTATTTTTCCTGCCATGCGCTGGCATGAGCGCCGTCTTTACATTCTATATGTTCTTTCTCTGCTGGTACGCCTCTACCCACCACCCCCATGTTACATTACCGGTGAGTTCCCTTCCAGAGAAAGGCTTGTCGCCATCGGAGCTCGAGAAGCTACCGAAAGTCCCTGGAAAAGAGCTAGTCATGGGCACTGAATGCGCCGTTTGCCTTGACGACATCGAGAACGAGCAACCGGCTCGAGTGGTTCCTGGTTGTAATCACGGGTTTCATGTGGAATGCGCCGACACTTGGCTTTCCAGGCATCCTCAATGTCCAGTCTGTAGAGCCAAGCTGGATCCTCAGCTTCTCAATTCATCGGAAAATCCATAA 390 0.5 MLDSIVFLVFFLPCAGMSAVFTFYMFFLCWYASTHHPHVTLPVSSLPEKGLSPSELEKLPKVPGKELVMGTECAVCLDDIENEQPARVVPGCNHGFHVECADTWLSRHPQCPVCRAKLDPQLLNSSENP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02047 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 121 IPR013083 -
Bach4g02047 129 SUPERFAMILY RING/U-box 72 121 - -
Bach4g02047 129 SMART ring_2 73 114 IPR001841 -
Bach4g02047 129 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
Bach4g02047 129 Pfam Ring finger domain 72 115 IPR001841 -
Bach4g02047 129 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02047 Bach-Chr4 27877335 27877724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g02047 4 128 C3H Transcription Factor Family AT5G42200 53.030 2.52e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g02047 K19037 - pop:7493995 185.652