Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02027 ATGCCAGAGGATGATGCAGAGCTAAGGGAAAAGACTGAGGAAGCAAAGCCAAGGAAAATGTATTGCAGAGCTTTGTCAAGGAATGGTAAGGAGCTTGAAGCAAACAAGTTGCCGAGAAGATTGATCAAGAAAAGTCCAAGGAAAAGGATTGGGATCCACATTGGTTGGAGGAGGAAAGAAGCAATTAGGACCCAGGTTTTGATTCCTATGCCAAGTGGACTAGTTGAGTTGTTTGTAACTAAACAGAATGACGATGAAGATGATACAAAGTATAGGAGAAGGAATGGGAAAGGGAACCAATCAAAAAACCTTGAAGCAAAAAGGAAGAGAAGGAAGAAGCTCAATGATAGGCTATACCACCTTCGGTCTTTGATACCCAGAATCTCGAAGTTAGACAGAACATCTAGTCTTGGGGATGCAATTGAGTTCGTGAAGGATTTGCAGAAGCAAGTGAAAGATCTCCAAGACCAGCTTGAAGAACATTCAGATACTGGCAATGAGAACAACATCAATGGCATTGGCAACAACCATGTGGATGTCCAACCAGAACCATGTGGAAGTGATAGCATTCATGGAATAATGTTTCATCCAGATATACCAGAAAAAGTAGAATGGAGTGGCACTGCCTTTGAGAAAATGAACAATTTAAGAATTCTCAGTGTTCACAATGCTGAATTTTCAATTGGCCCAAAAAATTTGCCAAATACTTTAAGGATGCTTACATGGGACAGATATCCCTCGGAGTTTTTACCAGAAGGATTTCATCCTAGAAAAATGGTTGTCTTAAATTTATGCAATAGCCGTATTGTTTCCTTAAAGCCATTACGGAAATTTGAAAAGCTCACTTGTATGGATTTCTCAGGCAGTCAACAATTAACTCTAATACCTGACATAGCTGGAGCCCCAAATTTAACAACGCTGAGGCTTGTGGGATGCACCAATCTAAAAGAGGTTCATGATTCTGTTGGAGGTCTTAATAAGCTCCTTTATTTAGACCTTGAGGGATGCACTAATCTTGAAATATTCCCACATGGAATCAGAATGACATCTCTTAGATATTTTAATCTCAAGAAATGCAGAAGTCTTCAACACTTCCCGGATATATTGGAACGGATGGTTTATCTTTTAAGTATTCATGCTCAAGGGGCTGGCATTAAGCAGATTCCACATTCCATTTGTTACCTGCCAGGACTTGAATATTTATATCTGTCAGATTGTTACGATTTGGTATCCCTCCCTGAAAGCATTTACCAATTAGATAGACTGACAATCCTTCATATAGAAAATTGCAAGAAGCTTCCTAAAATTTCAAGAGTTCCTAATTTAAGCATTATAAGAGCAGACGGTTGTATTTCTTTAACCTCAGAATCATCGAATACACTATGGTCTCAGGCACAACATGAGGTTGGATTCTTGGAAGTTTTCATGCCTAGAACACACATTCCAAATTGGTTTGACCATTGCTGCAAAGGGGGAAGTTTATCATTTTGGACTCGCAGGGAGTTCCCTCAGTGTGCTTTTGCAATTGTCTTTGGAACATCAACGAATAAAATATCATCAGAGGATGCCTTAGTTGAAATACTTGGCTATATTAATGGTTATACGACAGGGGACAGGCCAGCTAGCTATCTCATTAGAGAAGATGGTACCTTATTACTTACCCTGCTTGAATCTGTTACTAACTTTAACACTCATGATTGGAATCACGTGGAGATCAAGTGTATAGTGTCGCAAGGAAACTATGAAATAGATGAGTGTGGAGTTTATATATATAAGCAAGATATAAACATGGAAGATATTCAATTTGAGTGTCCCATTCCCCATAACTCAAATATGGATACAGTGATGTCAAGGGAAGATGAAGAGGTAAGAGATAAGATTGAGGAAGCAAAGCCAAGGAAAAGGTCCCACACAGAGTTTATGTCAAGGAATGATGAGAACATTCGTGAAGTAAAGGCAAGGAAGAAGTCCTGCAGAGTCATGTCAAGGAATGGTAAGCAGCTAGAAGCAGACAAGTTGCCAAGAAGATTCATAAAGAAAAGTGCAAGGAAAAGGATTAGGATCGACACTGGTTGGAAGAGGCAACCATTGTTCTCAAAAAATTTCAAGCTGTCATCCTCCTACCATTCAATTTGA 2136 0.3923 MPEDDAELREKTEEAKPRKMYCRALSRNGKELEANKLPRRLIKKSPRKRIGIHIGWRRKEAIRTQVLIPMPSGLVELFVTKQNDDEDDTKYRRRNGKGNQSKNLEAKRKRRKKLNDRLYHLRSLIPRISKLDRTSSLGDAIEFVKDLQKQVKDLQDQLEEHSDTGNENNINGIGNNHVDVQPEPCGSDSIHGIMFHPDIPEKVEWSGTAFEKMNNLRILSVHNAEFSIGPKNLPNTLRMLTWDRYPSEFLPEGFHPRKMVVLNLCNSRIVSLKPLRKFEKLTCMDFSGSQQLTLIPDIAGAPNLTTLRLVGCTNLKEVHDSVGGLNKLLYLDLEGCTNLEIFPHGIRMTSLRYFNLKKCRSLQHFPDILERMVYLLSIHAQGAGIKQIPHSICYLPGLEYLYLSDCYDLVSLPESIYQLDRLTILHIENCKKLPKISRVPNLSIIRADGCISLTSESSNTLWSQAQHEVGFLEVFMPRTHIPNWFDHCCKGGSLSFWTRREFPQCAFAIVFGTSTNKISSEDALVEILGYINGYTTGDRPASYLIREDGTLLLTLLESVTNFNTHDWNHVEIKCIVSQGNYEIDECGVYIYKQDINMEDIQFECPIPHNSNMDTVMSREDEEVRDKIEEAKPRKRSHTEFMSRNDENIREVKARKKSCRVMSRNGKQLEADKLPRRFIKKSARKRIRIDTGWKRQPLFSKNFKLSSSYHSI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02027 711 Coils Coil 97 117 - -
Bach4g02027 711 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 144 368 IPR044974 GO:0006952
Bach4g02027 711 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 147 IPR011598 GO:0046983
Bach4g02027 711 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 98 161 IPR036638 GO:0046983
Bach4g02027 711 MobiDBLite consensus disorder prediction 84 112 - -
Bach4g02027 711 Gene3D - 86 163 IPR036638 GO:0046983
Bach4g02027 711 SUPERFAMILY L domain-like 203 455 - -
Bach4g02027 711 Pfam Helix-loop-helix DNA-binding domain 106 148 IPR011598 GO:0046983
Bach4g02027 711 Gene3D Ribonuclease Inhibitor 202 377 IPR032675 -
Bach4g02027 711 SMART finulus 104 153 IPR011598 GO:0046983
Bach4g02027 711 Gene3D Ribonuclease Inhibitor 378 508 IPR032675 -
Bach4g02027 711 Coils Coil 137 164 - -
Bach4g02027 711 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02027 Bach-Chr4 27364378 27375075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g02027 186 438 WRKY Transcription Factor Family AT4G12020 36.264 1.13e-31 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g02027 HLH 6.8e-06 No_clan