Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g02014 ATGGAATCTTGGAGTTACACCCCTGAAGAGAAAAGCTATTTGTTTTCTGAGGAAATGGACTTTTCACTTGATGCTTTTATGAGAACTAGAAAAGCGCTGGTTGAATGGGACAATAAGGCCTCCTGTAACTTTGAAAGGGATGGATTTATTTCAGATAGAGAAGTAGTTAAAAGCATGGAATTCGTGGACTTGGGATTTCCTGATCTGTTCCGAAAATCTTTTCATGGTAGCCAGCTACTGGAAACATTTAGTTGTGACCTAGATAGTAATTGTAGTAAAAGAGTGAATTCCTCTACTCATGTTGTTGCTTTGGATTCATCTTTGGGGGAAGAAGAATTTGAGTCAAAGCATTCCAGTCCTCTAGTTGAATCTAAAACTCATGATTCGTCACTCATTGACTTGAAGCTAGGAAGATTAGCAGATTGTAAAGATGCAAGTTGTAATGAAATTGCAAAAGAAGGGTTAGCTTTATCCTCTACACCTCCAAGGGCACTTGCAAAGAGAGCTTGCACTTCTATCTCGCCTACTCAAAAATCTGTATGTCAAGTTTATGGTTGCAATATGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGTTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCACTGTAGCAGGTTCCATTTGCTAGCTGAGTTCGATGATGGTAAGCGTAGTTGTCGCAGACGCCTGGCCGGGCATAATGAACGTAGAAGGAAACCTCAGTTTGATTACATCTCTGGTAAACCGCATAAGATGCTTCAATCATATCAAGTCACATTGTCTATGAGAATGTTAAGGTGGACATATGGGAACAAAAGGAAGGTTAAAGGAATTGATGAAGTTGTCAAGTCTGAGATTTCGGCATGCAAGAATGGGTATCCAAGATACTCGAAGATTTCCAAACAAACCGGTCCTTATGGTGTTTTGCCTTTACAATACTATACAAATGAGTATCAGGTATCTTATTCAGGACTCTCAGGAGGTGAAAATACTGATCTGTTATCTCATATTGATGCCTCTTCTTTACCTTCTGCAACTTGCTCTGATGCGAGTCCTTATGTTTTGAAGGATTTCGCTGGTTTGCAGGTTCTCACCCAAATCTCTTCAGCGCTAACTGAAAATTCTGGTGAAAATTCTGGTGGAAATGTTCATTCTGGAGCACCTCTTCCATGGCTTGAAGCAACTGAGGGAACCCGGATTCATACTAAACCTGTTTTAGGGGACCTTTCCTCTTCAAACAAGTACAAAAAGTTGAACCCCAAACGGGTGGGAGCAGCTTGGGCAGAAAAGAGAAAGATTGAACTGGAGATGGAGAAGCTAGGGGAGGCTGTGAGGAATGGGTGTGATGCTAACTGGCTTCCTAATTTTGGTGGAGTCTGGCAATGTGGTAGCATAAAAGAATCCAGAAAAGAATTTGAGAGGGAGAAGTAA 1476 0.4092 MESWSYTPEEKSYLFSEEMDFSLDAFMRTRKALVEWDNKASCNFERDGFISDREVVKSMEFVDLGFPDLFRKSFHGSQLLETFSCDLDSNCSKRVNSSTHVVALDSSLGEEEFESKHSSPLVESKTHDSSLIDLKLGRLADCKDASCNEIAKEGLALSSTPPRALAKRACTSISPTQKSVCQVYGCNMDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQHCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPHKMLQSYQVTLSMRMLRWTYGNKRKVKGIDEVVKSEISACKNGYPRYSKISKQTGPYGVLPLQYYTNEYQVSYSGLSGGENTDLLSHIDASSLPSATCSDASPYVLKDFAGLQVLTQISSALTENSGENSGGNVHSGAPLPWLEATEGTRIHTKPVLGDLSSSNKYKKLNPKRVGAAWAEKRKIELEMEKLGEAVRNGCDANWLPNFGGVWQCGSIKESRKEFEREK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g02014 491 SUPERFAMILY SBT domain 180 260 IPR036893 GO:0003677|GO:0005634
Bach4g02014 491 Pfam Coiled coil protein 84 315 491 IPR028015 -
Bach4g02014 491 Pfam SBP domain 181 254 IPR004333 GO:0003677
Bach4g02014 491 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 137 396 IPR044817 GO:0003677
Bach4g02014 491 Gene3D - 172 242 IPR036893 GO:0003677|GO:0005634
Bach4g02014 491 FunFam Squamosa promoter-binding-like protein 14 172 242 - -
Bach4g02014 491 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g02014 Bach-Chr4 26983376 26987450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g02014 132 280 SBP-box Gene Family AT1G69170 56.376 8.71e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach4g02014 CCDC84 4.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g02014 - - gmx:100820149 438.728