Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01998 ATGGCAAAGTCAAGCAAGAAATCAGCTTCCAAAGTTGACGCCGCTCCAGCCGTCGTTCCAAAATCTGCGAAGAAAGGTGCCAAGAGAGATGCTGAGGATAAACTTGAGAAGCAGGCGAGTGCTAAGAAGCAGAAAAGAGAGGAGCTTGCTGACAAGCAATTGAATGCGAAGGTGCAAAGTAAAAAGAAACAGGAAAGTAGTTCGTCTGATTCTGGGGAAGATAAGAAACCTGCAGCTAAAGTTCCTGTTCCTTCAAAGAAAAAACCTACAAAAAATGGTACTCTAAGTACCCCTGCAAAGAAAAGCAAGCCAGCCAGCAGCTCCAGTTCTGATTCTTCTGATGACTCAGATGAGGAAGAAGCCCCAAAATCCAAGGTGAATGTAGCTGTTGCTGGTAAGAATGTAGCTGCTGCTGGTAAGAATGGACCTGCTGCTACAAAGAAGAAAGTTGATTCTAGTGAAAGTTCTGATTCTGATGACAGCAGCTCAGATGAAGATAATGCTCCAAAAGCCAAGGCGAAGGGACCTGCTGCTACAAAGAAGAAAGTTGATTCCAGTGAAAGCGCTGATTCTGATGACAGCAGCTCAGATGATGATAATGTGAAAACCTCTGCAGGTAGGAATGGAGCTGCTGAGAAGGTTGAGTCTAGTGACAGCTCTACTTCTGATAGTAGCTCGGATGAAGATGTTATGCCAGCTGCCGTTGCTCCAAAGAAGAAAGTGGAAGCAGTTGCTCCAAAGAAGAAAGTTGACACCAGTGACAGCTCAGACGATGAATCAAGTGAAAGCTCCCAAGAAGACAATGATCCAAAAACTAAGGTAACTACAGTATCCAAAGTTTCTACAGATCCAAAGAAGAAAGTTAAATCTAGTGACAGCTCAGATTCTGATAGCAGCTCCGATGAAGATGATGTCAAGGAAAAGATGGATGTTGATGATGATGATAGTTCTGAAGAAAGTGAAGAAGAGCCACAAAATAAAAAGATTAAAGTCTTGCCAAATGCTGGAAAACCTAATCTGAAAGCTGTCAAAAAGGATAGCAGTAGTGATAGTTCAGAGGATGATGATGATGATGATAGCTCTGAAGAGGAAGAGGTAGCAAAAAAGCCAAATGCTACCTCAAATGCTGGAAAACCTAATGTAAAAGCTGTTGAAAAGGATACTAGTAGTGATAGCTCTGATGATGATGATAGCTCTGAAGAGGATGAGAAATTGAAAAAGCCAAATGCTATATCAAATGCTGGAAAACCTAGTGTAAAAGCTGTCAAACAGGATAGCAGTAGTGATAGCTCAGATGATGAAGATGATAGCTCTGAAGAGGATGAGAAGGTGAAAAAGCCGAAAGATGTGAAGATGGTAGATGCAGCCTCACCAGAGCCAACTGCCAAGAATTTTAATTCAGCATCTGCTAATAAAACTCCTAAGACCCCGGCTACTCCTGTGGAACCAAATCCCACATCAAGGACACTGTTTGTTGGAAACTTGTCATTTAGTGTGGAACGAGCTGATGTGGAATCTTTTTTCGAAGATTGTGGAGAAATTGTTGATGTCCGCCTCGTCACAGACGAGGAAGGAAGGTTTAAAGGCTATGGACACGTCGAATTTGCTACTGCAGAAGCAGCACAAAATGGCTTGAAGTTGAATCAGAAGGAACTGTTGGGACGTGCTGTCAGACTTGATCTTGCACGTGAAAGGGGTGCATATACTCCGAAAAGCAGCAACTGGAGCAATTCCTTCCAGAAAGGCGGAAGGGGGCAGTCCCAAACAGTATTTGTAAAGGGTTTTGACTCATCCGTGGATGAACATCAGATTAGAACTAGCTTGGAGGAGCATTTTGGTTCTTGTGGAGAAATTACAAGGATATCAATTCCTAAAGATTATGAAAGTGGTGCTGTTAAGGGGTTTGCTTACATGGACTTCGGTGATGATAATGGCCTGAGCAAAGCATTAGAACTCAATCAATCTGAGTTAGGAGGTTATCCGCTGACGGTTGATGAAGCAAAGCCTCGTGATACTCAGGGTGGCAGTGGTGGCCGTGGTGGAAGAGGTGGTAGAGATTTTGGTGGCCGTGGCGGTGGTAGAGGTGGTAGAGATTTTGGTGGCCGTGGTGGAAGAGGTGATCGCGGAAGAGGTAATCGCGGTGGAAGGGGGGGTCGTGGGACCCCATATAAACCCAGCTTTGGTGCAGGAGGCACAGGGACCAAGACTACTTTCGCTGATGACTAGTTCGCTAGATTTTG 2240 0.4424 MAKSSKKSASKVDAAPAVVPKSAKKGAKRDAEDKLEKQASAKKQKREELADKQLNAKVQSKKKQESSSSDSGEDKKPAAKVPVPSKKKPTKNGTLSTPAKKSKPASSSSSDSSDDSDEEEAPKSKVNVAVAGKNVAAAGKNGPAATKKKVDSSESSDSDDSSSDEDNAPKAKAKGPAATKKKVDSSESADSDDSSSDDDNVKTSAGRNGAAEKVESSDSSTSDSSSDEDVMPAAVAPKKKVEAVAPKKKVDTSDSSDDESSESSQEDNDPKTKVTTVSKVSTDPKKKVKSSDSSDSDSSSDEDDVKEKMDVDDDDSSEESEEEPQNKKIKVLPNAGKPNLKAVKKDSSSDSSEDDDDDDSSEEEEVAKKPNATSNAGKPNVKAVEKDTSSDSSDDDDSSEEDEKLKKPNAISNAGKPSVKAVKQDSSSDSSDDEDDSSEEDEKVKKPKDVKMVDAASPEPTAKNFNSASANKTPKTPATPVEPNPTSRTLFVGNLSFSVERADVESFFEDCGEIVDVRLVTDEEGRFKGYGHVEFATAEAAQNGLKLNQKELLGRAVRLDLARERGAYTPKSSNWSNSFQKGGRGQSQTVFVKGFDSSVDEHQIRTSLEEHFGSCGEITRISIPKDYESGAVKGFAYMDFGDDNGLSKALELNQSELGGYPLTVDEAKPRDTQGGSGGRGGRGGRDFGGRGGGRGGRDFGGRGGRGDRGRGNRGGRGGRGTPYKPSFGAGGTGTKTTFADD 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01998 741 Coils Coil 28 55 - -
Bach4g01998 741 Gene3D - 414 571 IPR012677 -
Bach4g01998 741 Gene3D - 572 687 IPR012677 -
Bach4g01998 741 FunFam Nucleolin 2 573 721 - -
Bach4g01998 741 MobiDBLite consensus disorder prediction 280 305 - -
Bach4g01998 741 CDD RRM2_NUCLs 589 667 IPR034350 -
Bach4g01998 741 MobiDBLite consensus disorder prediction 460 487 - -
Bach4g01998 741 SMART rrm1_1 489 560 IPR000504 GO:0003723
Bach4g01998 741 SMART rrm1_1 589 665 IPR000504 GO:0003723
Bach4g01998 741 MobiDBLite consensus disorder prediction 1 487 - -
Bach4g01998 741 MobiDBLite consensus disorder prediction 163 200 - -
Bach4g01998 741 MobiDBLite consensus disorder prediction 660 741 - -
Bach4g01998 741 MobiDBLite consensus disorder prediction 23 81 - -
Bach4g01998 741 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 490 557 IPR000504 GO:0003723
Bach4g01998 741 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 590 662 IPR000504 GO:0003723
Bach4g01998 741 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 628 721 - -
Bach4g01998 741 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 588 669 IPR000504 GO:0003723
Bach4g01998 741 MobiDBLite consensus disorder prediction 700 714 - -
Bach4g01998 741 MobiDBLite consensus disorder prediction 213 228 - -
Bach4g01998 741 SUPERFAMILY RNA-binding domain, RBD 585 699 IPR035979 GO:0003676
Bach4g01998 741 MobiDBLite consensus disorder prediction 241 256 - -
Bach4g01998 741 MobiDBLite consensus disorder prediction 306 320 - -
Bach4g01998 741 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 488 564 IPR000504 GO:0003723
Bach4g01998 741 SUPERFAMILY RNA-binding domain, RBD 482 585 IPR035979 GO:0003676
Bach4g01998 741 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01998 Bach-Chr4 26325065 26331327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01998 489 657 Eukaryotic Initiation Factors Gene Family AT4G34110 28.488 1.31e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01998 K11294 - gmx:100786132 382.489