Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01954 ATGGCTTCAGCTTCCAAAGAGAATAATCATCTTGTGAAAACTTCTAATGAAGAAGAAGGAGAGGATTATTATGGCGCGTGCGCCTTACTTCTTGGCTGCAATCCCATATTCTCTGCAGTTCTGAAGGCGGCCCTTGAGCTCCACTTGTTTGAAATCATTGCCAATGAGGCAAGTTCATTTGGTGCATCCATGTCAGTCTCTGAAATTGCTTCTCACTTTCCAACCCAACACCCAGAGATGCCTTGGAGGCTCGAGCGCATGCTGCGTCTGCTGGTCTGCCACTCTCTTCTTACTTGTTCCACACGCACCAGTCAAGATGGTAGAGCTGAGAGAGTTTATGGACTCACACCTGTTGCTGAATACTTTGCACATGATATCTCTGCTGAGTTATTTCGTTCATTGTCAAAATTTCTCAATCATCAAGCCATTGCGAAGGTCTTTCTTAATTTCAAGGATGCGATTCTTGATTCGGAAGCTGATCTGTTCAAGAAAATTCATGGGAAGACTGTGTACGAATACATGGCCACAGATCCAACACTGAGTGAAGCTTTTCAAGGTCTCATGACGAAGTTTTGCTTGATAGACACATTAAGTATACTTGAAGTATACCATGGATTTGAGGGAATTTCAACGCTGGTTGATGTGGGAGGAGGCACAGGCCAAAATTTGCAAATGATAATATCTGAGTATCCTTCAATAAAAGGCATTAATTTTGACCTGCCAAAGGTGATAGAAAATGCACCGCAAATTTCAGGGATAGAGCATGTTGGAGGAGATATGTTTACTAGTGTTCCAAGCGGTGATGCCATGATATTAAAGGCTATAACCCATAATTGGTCCGATGAAACTTGTTTGACAATTCTGAAGAATTGCAACAAAGCATTGCGTGAGAAGGGGAAGGTGATTATTGTGGAAGTCATAATGCCAGAAACAACTGAACCAACAGTGAAAGCTCAGTTAACTTCCCGTCTTGACAACATGATGTTCTTATATGCTGGAGGAAGGGAGAGAACTGAGAAAGAATTTGAGGTTTTGTGCAAGAAATCTGGATTTTCAGGATTTCAAGTCGTCTGTCGTGCGCACTCTGCTTTGGGGGTAATAGAATTTCATAAGGGGTAA 1119 0.4227 MASASKENNHLVKTSNEEEGEDYYGACALLLGCNPIFSAVLKAALELHLFEIIANEASSFGASMSVSEIASHFPTQHPEMPWRLERMLRLLVCHSLLTCSTRTSQDGRAERVYGLTPVAEYFAHDISAELFRSLSKFLNHQAIAKVFLNFKDAILDSEADLFKKIHGKTVYEYMATDPTLSEAFQGLMTKFCLIDTLSILEVYHGFEGISTLVDVGGGTGQNLQMIISEYPSIKGINFDLPKVIENAPQISGIEHVGGDMFTSVPSGDAMILKAITHNWSDETCLTILKNCNKALREKGKVIIVEVIMPETTEPTVKAQLTSRLDNMMFLYAGGRERTEKEFEVLCKKSGFSGFQVVCRAHSALGVIEFHKG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01954 372 FunFam Caffeic acid 3-O-methyltransferase 4 122 - -
Bach4g01954 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 367 IPR029063 -
Bach4g01954 372 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Bach4g01954 372 PANTHER O-METHYLTRANSFERASE 37 354 IPR016461 GO:0008168
Bach4g01954 372 SUPERFAMILY "Winged helix" DNA-binding domain 27 125 IPR036390 -
Bach4g01954 372 CDD AdoMet_MTases 211 308 - -
Bach4g01954 372 Pfam O-methyltransferase domain 149 352 IPR001077 GO:0008171
Bach4g01954 372 Gene3D - 2 122 IPR036388 -
Bach4g01954 372 Gene3D Vaccinia Virus protein VP39 126 371 IPR029063 -
Bach4g01954 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 371 IPR016461 GO:0008168
Bach4g01954 372 Pfam Dimerisation domain 40 92 IPR012967 GO:0046983
Bach4g01954 372 PIRSF O-mtase 3 371 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01954 Bach-Chr4 24886714 24891212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01954 28 371 Monolignol Biosynthesis Gene Families AT5G54160 46.667 2.52e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01954 - - gmx:100798347 419.083