Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01952 ATGGCTTCTGCTTCCAAAGAGCATAATCATCTTGTGAAAACTTCTAATGAAGAAGAGGAAGAGGATTATTATGGCGCTTGCGCCTTACTTCTTGGCTGCAATCCCATATTCTCTGCAGTTCTGAAGACGGCCCTTGAGCTCCACTTGTTTGAAATCATTGCCAATGAGGCAAGTTCATTTGGTGCATCCATGTCAGTCTCTGAAATTACTTCTCACTTTCCAACCCAGAGATGCCTTGGAGGCTCGAGGGCATGCTGCGTCTGCTGGCCTGCCACTCTCTTCTCACTTGTTCCACACGCACCAGTGAAGATGGTAGAGCTGAGAGAGTTTATGGACTCACACCTGTTGCTGAATACTTTGCACATGATATCTCTGCTGAGTTATTTCGTTCATTGTCAAAATTTCTCAATCATCAAGCCATTGCGAAGTCTTAATTTCAAGGATGCGATTCTTGATTCGGAAGCTGATCTGTTCAAGAATATTCATGGGAAGACTGTGTACGAATACATGGACACAGATCCAACACTGAGTGAAGCTTTTCAAGGTCTCATGACGAAGTTTTGCTTGATAGACACATTAAGTATACTTGAAGTATACAATGGATTTGAGGGAATTTCAACGCTGGTTGATGTGGGAGGAGGCACAGGCCAAAATTTACAAATGATAATATCTGAGTATCCTTCAATAAAAGGCATTAATTTTGACCTACCAAAGGTGATAGAAAATGCACCGAAAATTTCAGGGATAGAGCATGTTGGAGGAGATATGTTTACTAGTGTTCCAAGCGGTGATGCCATGATATTAAAGGCTATAACCCATAATTGGTCCGATGAAACTTGTTTGACAATTCTGAGGAATTGCAACAAAGCATTGAGTGAAAAGGGGAAGGTGATTATTGTGGAAGTCATAATGCCAGAAAGAATTGAACCAACAGTGAAAGCTCAGTTAACTTCCCGTCTTGACAACATGATGTTCTTATATGCTGGAGGAAGGGAGAGAACTGAGAAAGAATTTGAGGCTTTGTGCAAGAAATCTGGATTTTCAGGATTTCAAGTCGTCTGTCGTGCGCACTCTGCTTTGGGGACGAGGGTGGCGCTCGACTGGGCTCAACGGCGTGGGGTGGTTGCTGGGTCCACTCGTCCCACTGTGAGTGCAAGTTGGGTGCAGATTCAAGCCGTGGTTCGCGTGGGTTTGCAACAGAGCCGGCTCTGGTTCAGCTGCACGCAAGAGCTGGTTCGGCAAGTAGGTTCATCGGTCTTGGTTGATGGTGGAATGGCTAGTTCGCTGGATGTTGGGCTAGCCGATGAGAACTCGGGTGCACTCGGCTTGGGTCTGCTTCGGTGTGATTCAAGCGGCTGCTTGTGCCTTGTGCAAGTTGGTATGAGGTGCTCTGTTCAAGTGCTGGGAAAACAGAGTGTCTGCAGGTGTGATGTTGCAGCGGTGATGGAGACTCGTTGGGTGTTGGGTGTTAGTTGTTGGCCTCTTGGTGCGACAGCAATCTAA 1503 0.4604 MASASKEHNHLVKTSNEEEEEDYYGACALLLGCNPIFSAVLKTALELHLFEIIANEASSFGASMSVSEITSHFPTQRCLGGSRACCVCWPATLFSLVPHAPVKMVELREFMDSHLLLNTLHMISLLSYFVHCQNFSIIKPLRSLNFKDAILDSEADLFKNIHGKTVYEYMDTDPTLSEAFQGLMTKFCLIDTLSILEVYNGFEGISTLVDVGGGTGQNLQMIISEYPSIKGINFDLPKVIENAPKISGIEHVGGDMFTSVPSGDAMILKAITHNWSDETCLTILRNCNKALSEKGKVIIVEVIMPERIEPTVKAQLTSRLDNMMFLYAGGRERTEKEFEALCKKSGFSGFQVVCRAHSALGTRVALDWAQRRGVVAGSTRPTVSASWVQIQAVVRVGLQQSRLWFSCTQELVRQVGSSVLVDGGMASSLDVGLADENSGALGLGLLRCDSSGCLCLVQVGMRCSVQVLGKQSVCRCDVAAVMETRWVLGVSCWPLGATAI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01952 500 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 354 IPR029063 -
Bach4g01952 500 Gene3D Vaccinia Virus protein VP39 177 356 IPR029063 -
Bach4g01952 500 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Bach4g01952 500 Pfam O-methyltransferase domain 146 348 IPR001077 GO:0008171
Bach4g01952 500 Pfam Dimerisation domain 40 75 IPR012967 GO:0046983
Bach4g01952 500 CDD AdoMet_MTases 207 304 - -
Bach4g01952 500 Gene3D - 36 195 IPR036388 -
Bach4g01952 500 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 366 IPR016461 GO:0008168
Bach4g01952 500 PANTHER O-METHYLTRANSFERASE 37 347 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01952 Bach-Chr4 24816809 24825568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01952 21 356 Monolignol Biosynthesis Gene Families AT5G54160 39.335 3.24e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01952 - - gmx:100798347 331.643