Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01944 ATGGGTGCTGGATTAATGGATGACCCATTGATAGCAGAGGTGTATTCAGATTCTGCCATGAGAGTCACTGATAAAGAGGAGAAACGGTTGCCGAAAGGTGGCACGGCAACCCGGACACCACAGGTAGGAGGCACAACGGGAGAGGAAAGAGAAAGAGGACTGTTACTGCTCTGGACAGTATTGGGGGAAGGATGTAATGGAGAAATCTCCTTTGCAGACTCTTTAGAAGCGTTTGGTGCTGGCCAGGATGATCCTGTTAGTGTATCAATTGGAGGACCTGTCATATCTAAGTTTATTTCTGCACTTCGTGAGCTTGCTACTTTTAAAGAGCTTCTTCGATCACAAGTAGAGCATGTGTTGATTGACCGGCTTTCTCAGTTTATCACTGTTGATTTGCAAGATGCTAAGGATTCTCGCCATCGTTTTGACAAAGCTGAATACTCTTATGATCAGGCACGTGAAAAGTTTGTCTCACTGAAGAAGAATACACGGGAAGACATTGTTGCTGAATTAGGAGAGGATCTACAAAATTCGAAGTCAGCATTTGAAAATAGTCGCTTCAATCTAGTAAACTCACTCATGAATATTGAAGTGAAAAAGAAGTATGAGTTCTTGGAGTCCATTAGTGCAATAATGGATGCTCATCTGAGATATTTTAAGTTGGGTTATGACTTACTGAGCCAAATGGAGCCCTATGTTCACCAGGTACTAACATACGCACAACAATCTAAAGAACTGGCTAATATTGAGCAAGACAAGCTTGCTAAACGGATCCAGGAATACAGAACACAAGCTGAGCTAGACAACATACGAGCTTCTAGCAACACAGAACCTTTATCAGGTGCTGATGCCACTCGTGTTGTTGGTATGAATTCTTACAGAAGCTTTGAAACAGTAATGCAGTCTGCAAGCAGTGGTGAGGTTCAAACAATTAAACAGGGTTATCTATTAAAACGATCATCAAACTTGCGTGGTGATTGGAAGAGGAGGTATTTTGTACTTGATAACCGAGGGAATTTATATTATTACAGAATGAAAGGAGTCAAAACTATGGGCTCCCAGACATATAATTTTACTCGTACAACTGAACAAAACAGTGGCATGTTTGGTAGATTCCGTTCAAGGCACAAGAGGGCATCATCATTAAACGAAGAAATTTTGGGATGTCAAGCAGTTGATCTGTGCACATCAACTCTTAAGATGGATGCAGAGGATACAGATCTACGACTTTGCTTCCGTATAATTTCTCCTTCGAAAACATATACATTGCAGGCTGAAAATGAGACTGATAGGATGGACTGGGTAAACAAAATCACTGGAGCTATTGCATCACGTTTTAATTCTCAGTTTCTTCAACAGCCTCGACATGATAATAGCTCAGGAACTGGTGCTTCTTGGAATAGTCAAGCACCAGATAACTACAGATGTTTGACAGATGATTTATGTTCCAAGGAAGTCAATAATGTCTCTAAGATTTTAAGGGAAATCCCTGGGAATGATAAATGCGCTGAGTGCAATTCTCCTGAACCAGATTGGGCATCTTTAAACCTTGGGATATTGTTATGTATTGAATGCTCTGGTGTTCATCGAAATCTTGGAGTTCATATCTCAAAGGTGAGATCTATAACATTAGACGTCAAGGTTTGGGAACCTACTATTTTGGACTTGTTTCGTAATTTGGGTAATGCTTATTGCAACTCTATCTGGGAGGGATTACTTCTACTTGACAATGAAAGTGTAGAATCAAATGCACCTATAAAACCATGCCCCACAGATGCCTTTCAACATAAGGAAAAGTACATCCAAGCAAAGGTGAGCAGTATATGGAGATCTCTGTAG 1839 0.4062 MGAGLMDDPLIAEVYSDSAMRVTDKEEKRLPKGGTATRTPQVGGTTGEERERGLLLLWTVLGEGCNGEISFADSLEAFGAGQDDPVSVSIGGPVISKFISALRELATFKELLRSQVEHVLIDRLSQFITVDLQDAKDSRHRFDKAEYSYDQAREKFVSLKKNTREDIVAELGEDLQNSKSAFENSRFNLVNSLMNIEVKKKYEFLESISAIMDAHLRYFKLGYDLLSQMEPYVHQVLTYAQQSKELANIEQDKLAKRIQEYRTQAELDNIRASSNTEPLSGADATRVVGMNSYRSFETVMQSASSGEVQTIKQGYLLKRSSNLRGDWKRRYFVLDNRGNLYYYRMKGVKTMGSQTYNFTRTTEQNSGMFGRFRSRHKRASSLNEEILGCQAVDLCTSTLKMDAEDTDLRLCFRIISPSKTYTLQAENETDRMDWVNKITGAIASRFNSQFLQQPRHDNSSGTGASWNSQAPDNYRCLTDDLCSKEVNNVSKILREIPGNDKCAECNSPEPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTILDLFRNLGNAYCNSIWEGLLLLDNESVESNAPIKPCPTDAFQHKEKYIQAKVSSIWRSL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01944 612 CDD BAR_SFC_plant 61 232 IPR035670 -
Bach4g01944 612 ProSiteProfiles PH domain profile. 309 443 IPR001849 -
Bach4g01944 612 Gene3D - 309 447 IPR011993 -
Bach4g01944 612 ProSiteProfiles ARF GTPase-activating proteins domain profile. 487 604 IPR001164 GO:0005096
Bach4g01944 612 Pfam PH domain 311 442 IPR001849 -
Bach4g01944 612 Pfam Putative GTPase activating protein for Arf 489 604 IPR001164 GO:0005096
Bach4g01944 612 Gene3D Arf GTPase activating protein 473 609 IPR038508 -
Bach4g01944 612 SMART PH_update 310 445 IPR001849 -
Bach4g01944 612 SMART arf_gap_3 487 612 IPR001164 GO:0005096
Bach4g01944 612 SUPERFAMILY ArfGap/RecO-like zinc finger 487 604 IPR037278 -
Bach4g01944 612 Gene3D Arfaptin homology (AH) domain/BAR domain 57 267 IPR027267 -
Bach4g01944 612 SUPERFAMILY BAR/IMD domain-like 62 332 IPR027267 -
Bach4g01944 612 Pfam BAR domain of APPL family 70 245 IPR004148 GO:0005515|GO:0005737
Bach4g01944 612 SUPERFAMILY PH domain-like 224 442 - -
Bach4g01944 612 CDD PH_ACAP 312 447 - -
Bach4g01944 612 Coils Coil 244 264 - -
Bach4g01944 612 PRINTS HIV Rev interacting protein signature 541 562 IPR001164 GO:0005096
Bach4g01944 612 PRINTS HIV Rev interacting protein signature 518 535 IPR001164 GO:0005096
Bach4g01944 612 PRINTS HIV Rev interacting protein signature 499 518 IPR001164 GO:0005096
Bach4g01944 612 CDD ArfGap 491 604 - -
Bach4g01944 612 SMART 5bar 21 235 IPR004148 GO:0005515|GO:0005737
Bach4g01944 612 MobiDBLite consensus disorder prediction 22 47 - -
Bach4g01944 612 PANTHER CENTAURIN/ARF 59 605 IPR045258 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01944 Bach-Chr4 24402714 24436373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01944 487 561 C2H2 Transcription Factor Family AT3G07940 52.000 5.97e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01944 K12489 - gmx:100796740 891.338