Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01925 ATGGCTGATCGAACGAAGGGAGTCGCCCTTATTGGCGTTTCTTCAATCCTCCTTGTGGCAATGGTAGCTGCTGTTGCCATTAGTCTAGAAAGCGAAGGCGAAAACAAGAAAGCAGGATTTGGCGTTGATGGTGCAGGTGATGGCCGGAGCCTGATATCAAGCTCTCAGAAGAACATTGAGATGCTTTGCCAGCCAACAAATTACAAAGAAATCTGCAAGAAGACCCTCTCCAAGGCTGCTAATGAAACCTCTGACCCTAAAGAGCTTATCAAAGCTGGGTTTAAGGCCAGCATTGAGGGGCTGAAAAACATCATAAACAACTCAACACTCTATAAGGAAATTACCAGGGACAACAGGACCAGACAAGCCGTGGATATCTGCAAGGAAGTCATGGACTATGCGGTGGACAATTTTAACCAATCTATTCAAAAGTTGGATGCTTTTGAACCGAGCAAGATTAATGAGTATGCTTATGATCTCAAAGTTTGGCTTGGAGCTACAATCTCACACCAGCAAACATGTTTGGATGGGTTTGAGAAGACACACACTACAGCTGGCCAAACAATGGCCAAGGCATTGAATGTTTCCATGGAGATGAGTAGTAATGCTCTTGCTATAATTACCAAGTTCTCTGATTTGCTCAAGAATTCCCATATAAGCATAAACAGGAAGCTTGGTTCTCCAGTAAAAGTTATGGCGGGTAATGAAGATGATTTCCCTTCGTGGGTGAGTGAAGGGCAGAGAAGGCTCCTCCAGGTTGGTCCAGATGGGGTTAAGCCTAATGTGATTGTGGCTCAAGATGGGACTGGCAATTTTAAGACACTCACTGATGCTCTTAAAACTGTGCCTCCACAAAATGCTGTTCCTTTCGTGATTTATGTCAAAGCTGGTTTATATGATGAGTTGGTGAGGGTGGATAAAACCATGACCCATGTCACTGTTATTGGAGATGGCCCCACAAATACCAGGTTCACTGGTAGACTCAACTTTGTAGATGGCCAGCAAACATACTTCACTGCAACATTCGGCGTGAATGGTGCTTTCTTCACTGCCAAGAACATTGGGTTTGAGAACACAGCAGGGCCTGAGAAGCACCAAGCCGTTGCACTTCGTGTAACTGCAGACAACTGTGTCTTCTACAACTGCGTCATGGATGGTTACCAAGATACCCTCTATGTCCAATCTCAACGCCAATTCTTCCGTGACTGCACCATTACAGGCACAATTGATTTCGTCTTTGGTGATGCAGAAGGAGTTTTCCAGAATTGCAAGCTGATAGTAAGAAAACCCTCTCCTAACCAACAATGCATTGTGACAGCAGGTGGCAGAAAAGATATCAATTCAAAGAGTTCCCTAGTTTTCCAGAGCTGCCATTTTACTGTAGAGCCAGCATATATTGCCGACAAGGGACGCAATGTAGTATCTTATCTGGGAAGGCCATGGAAGCAATATGCAAAGACTGTCATCATGGACTCTCTAATTGACGCCTTTTTTGAGCCTCAAGGATTTCTTCCATGGGCTGGAGCTAATTACCATCAGACTTGCTTCTATTTTGAGTACAACAACAAGGGTCCTGGTGCTGACACGTCTATGAGAGTTAAATGGCCAGGTGTCAAAGTGCTCAGTGCAGTTGAAGCTAACGATTTCTATCCTCAGAAGTTCTATGAGCTTAAGGATGTAGCTATTAAAGATTCATGGATCGTTGCCTCCGGAGTACCATACTCTCCTGGTCCCTTGCCCTTGGCTTAG 1749 0.4471 MADRTKGVALIGVSSILLVAMVAAVAISLESEGENKKAGFGVDGAGDGRSLISSSQKNIEMLCQPTNYKEICKKTLSKAANETSDPKELIKAGFKASIEGLKNIINNSTLYKEITRDNRTRQAVDICKEVMDYAVDNFNQSIQKLDAFEPSKINEYAYDLKVWLGATISHQQTCLDGFEKTHTTAGQTMAKALNVSMEMSSNALAIITKFSDLLKNSHISINRKLGSPVKVMAGNEDDFPSWVSEGQRRLLQVGPDGVKPNVIVAQDGTGNFKTLTDALKTVPPQNAVPFVIYVKAGLYDELVRVDKTMTHVTVIGDGPTNTRFTGRLNFVDGQQTYFTATFGVNGAFFTAKNIGFENTAGPEKHQAVALRVTADNCVFYNCVMDGYQDTLYVQSQRQFFRDCTITGTIDFVFGDAEGVFQNCKLIVRKPSPNQQCIVTAGGRKDINSKSSLVFQSCHFTVEPAYIADKGRNVVSYLGRPWKQYAKTVIMDSLIDAFFEPQGFLPWAGANYHQTCFYFEYNNKGPGADTSMRVKWPGVKVLSAVEANDFYPQKFYELKDVAIKDSWIVASGVPYSPGPLPLA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01925 582 CDD PMEI-like_3 62 211 - -
Bach4g01925 582 Pfam Pectinesterase 261 555 IPR000070 GO:0030599|GO:0042545
Bach4g01925 582 SUPERFAMILY Pectin lyase-like 258 556 IPR011050 -
Bach4g01925 582 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Bach4g01925 582 FunFam Pectinesterase 4 258 578 - -
Bach4g01925 582 FunFam Pectinesterase 55 211 - -
Bach4g01925 582 NCBIfam pectinesterase inhibitor domain 55 209 IPR006501 GO:0004857
Bach4g01925 582 Gene3D - 258 579 IPR012334 -
Bach4g01925 582 PANTHER PECTINESTERASE 15 567 - -
Bach4g01925 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 211 IPR035513 -
Bach4g01925 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Bach4g01925 582 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Bach4g01925 582 SMART PMEI_2 54 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01925 Bach-Chr4 22488300 22490682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01925 2 579 Carbohydrate Esterase AT3G05610 45.095 0.0 532