Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01920 TTCCATTACTCTGCCGCCTCTCTCCTGTGTTCTTTGAGCACAACATCTCCATATCACGTTCGAGTTCCGAATACATGGCAGAAGAGGATACAAAGCCTATCAATTATATTTCTGAGGTTGTTTTGAAGAAGAGAAAAAGCAGTGAAGCACGGGCATTGAGGACAAAGGAACAACTTCAGCAAAAGAAGTTCAAAAGCAGGAAGAGCAATGAGTATGTCAAAAAGCCTGAGGATTTTATTATAGAGTATCGCAGCAGGGAGCTCGACCTGATAAGAATGAAACAGAGGATCAAGAGGAAACGACCGGCCCTTTTAACACCTAAGTCAAAGTTATTAATAATCATACGGATACAGGGAAAAAATGACATGCATCCAAAAACTCGAAAGGTGTTGTACAGCTTGGGATTGAGAAGAATATTCAGTGCTGTTTTTGTCAAAGTGACTGAAGGAATAATGGATAAGCTGCAGAAGGTGGAACCATATGTTACCTATGGGTATCCAAATCTTAAAAGTGTAAAGGAGCTAATTTACAAAAAGGCACATGCGACAATAGACAAGCAGAAAGTTCCTCTGACAGACAATAACCTTATTGAGCAGGAATTGGGGAAACATGGTATTGTATGTTTAGAAGACATAGTGCATGAAATTGCTAATGTTGGTGCACACTTTAAGGAAGTCGTTAGATTTTTGTGGCCCTTTCAACTCAACAAACCAACAGAAGGATTACAAGGATCAAAAACCTTGTACAAGGATGGTGGAGACGCTGGGAACCGCGAAGATATGATTAATGAACTCATCAATAAAATGAATTAG 812 0.3953 MAEEDTKPINYISEVVLKKRKSSEARALRTKEQLQQKKFKSRKSNEYVKKPEDFIIEYRSRELDLIRMKQRIKRKRPALLTPKSKLLIIIRIQGKNDMHPKTRKVLYSLGLRRIFSAVFVKVTEGIMDKLQKVEPYVTYGYPNLKSVKELIYKKAHATIDKQKVPLTDNNLIEQELGKHGIVCLEDIVHEIANVGAHFKEVVRFLWPFQLNKPTEGLQGSKTLYKDGGDAGNREDMINELINKMN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01920 245 NCBIfam 60S ribosomal protein uL30 14 245 IPR005998 GO:0000463|GO:0003735|GO:0022625
Bach4g01920 245 Gene3D - 86 245 IPR036919 -
Bach4g01920 245 PANTHER 60S RIBOSOMAL PROTEIN L7 9 245 IPR039699 -
Bach4g01920 245 SUPERFAMILY Ribosomal protein L30p/L7e 86 245 IPR036919 -
Bach4g01920 245 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Bach4g01920 245 FunFam 60S ribosomal protein L7 86 190 - -
Bach4g01920 245 CDD Ribosomal_L7_archeal_euk 86 245 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01920 Bach-Chr4 22252829 22256672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01920 1 245 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 55.061 1.90e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01920 K02937 - qsa:O6P43_017954 379.793