Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01888 ATGGCTCGCTCTGTTCCTTTCGTTTCCGCCATTTTTGTCCTCCTTCTCCTTCTCGTAGCAACTGAGATGGGGACGATGGTTGTAGAAGCAAGAACCTGTGACTCTCAAAGCCACAGTTTCAAGGGAGCATGTCTGAGTGACACTAACTGTGCTTCTGTTTGCAAAACCGAGGGTTTCCCAGATGGACATTGCCGTGGCTTCCGTCGCAGATGCTTCTGCAGGAAACCTTGTTAG 234 0.5 MARSVPFVSAIFVLLLLLVATEMGTMVVEARTCDSQSHSFKGACLSDTNCASVCKTEGFPDGHCRGFRRRCFCRKPC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01888 77 Gene3D - 31 77 IPR036574 -
Bach4g01888 77 Pfam Gamma-thionin family 31 77 - -
Bach4g01888 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Bach4g01888 77 SMART gth_4 32 77 IPR003614 GO:0006952
Bach4g01888 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Bach4g01888 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Bach4g01888 77 PANTHER DEFENSIN-LIKE PROTEIN 1 10 74 - -
Bach4g01888 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01888 Bach-Chr4 19020677 19021005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01888 1 77 Plant Defensins Gene Families AT2G02120 59.740 6.76e-30 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01888 - - gsj:114420878 106.301