Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01887 ATGGCTCGCTCTACGCCATTGATTTCCACCATCTTTGTCATCCTCCTTCTTCTTGTAGCCACTGAGATGGGTACAAAGGTGGCAGAAGCAAGGACGTGTGAGTCTCTCAGCCACCGTTTCAAGGGAATATGTGTGAGGAAATCCAACTGTGCTGCTGTTTGCCAAACAGAGGGTTTCTCCGGCGGCCATTGCCGTGGCTTCCGCCGCCGATGCTTCTGCACCAAACATTGTTAG 234 0.5214 MARSTPLISTIFVILLLLVATEMGTKVAEARTCESLSHRFKGICVRKSNCAAVCQTEGFSGGHCRGFRRRCFCTKHC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01887 77 Pfam Gamma-thionin family 31 77 - -
Bach4g01887 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Bach4g01887 77 SMART gth_4 32 77 IPR003614 GO:0006952
Bach4g01887 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Bach4g01887 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Bach4g01887 77 ProSiteProfiles Invertebrate defensins family profile. 30 75 IPR001542 GO:0006952
Bach4g01887 77 Gene3D - 31 77 IPR036574 -
Bach4g01887 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Bach4g01887 77 PANTHER DEFENSIN-LIKE PROTEIN 1 8 77 - -
Bach4g01887 77 CDD Knot1 42 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01887 Bach-Chr4 19011076 19011434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01887 1 77 Plant Defensins Gene Families AT2G02100 63.636 9.90e-32 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01887 - - nnu:104592925 129.798