Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01880 ATGGCTGAAGATTGTGTTGGAAGCACTGATGCAACCTCTTGTTCGACCCCATTAAACTGGTGGGATATCCATGCAAGTTCTCTTTCTTCATGGAGTAACACTAACAACTCATGGATCAACCAACCAGACCCTAATTCTTCATCTTCTTGTGAGGATGAGATATCGGTTTCTACATCTTTCACTAATGCATTCAACCATTCAAGCCTCACAGTTGAGTCCTCTCGCAGGCTTGTTGAGCCTTCACTTTCCTCCAACGAGTTGACGGGAGTAAATGCTTCAGCTGATAATCAACTTTGGAGCCATGTTCTATTAGGGGTTGGAGGCAACGGAGAACTTCACAACAATCAAGTAATTGGTGAGAATTTCCTTGATACATTATCATCTAAAAGCATGACAAAGGCTATGTTTGAGCCAGCTTGCGACTACTTGAAGAAACTAGATACCAGTTGGACATACAATAACTCAACATCTTTCAATAGCTTTGAGAAGCACTTAAACGGGTTCAGTGAGGCTATGATAGAAAATGAAAGATCAACCAAGTTATCCAATCTTGTAAGTACTTGGTCTATAGCCCCACCAGCCACAGAAGTCAATAGCCATTTTGAACCACAAACATTTTCATTTGATCATTATTCACAATCTGATTCTTGCCATATCAAGCCACGTTTTGGAAGTTCCACATCAAGTGCTTTTGGAGAAGAAAATAGACAATGTGGAAAATTTCCTTGCTATGGTCTTGACATGAAGGTCAAGCAAGAAAATCAAGCAAGGGAAGTTACTGGAGCTTTATTTGGGAGACCATATAATAGTATGGTGTATCAACAAGGATTCCATAGTCCATTGGTGGGGGACAATATTAGTAAACTTTTTTATGGAACACCCAATACTTCTTCTGGCATTAATTTTTTTTCTGATGTTATACCGCTAAACAATCGCCTTGGAAGGCCACTAATTGGAATCCATGGACATAAACCCAGCGTGAATTCCTTTAATTTATCCAAGCTTAAGAAGCAAGGTCTCCAGACATCATCACCAACAAGAACTAATTGTGAAACAGATCAGGGAAGTGCAGGTGAATCAAAGAAGAAAAGATCTGAAGACTCTTCAGAATCAATCTTAAAGAAGCCTAAGCAAGACACATCTACAGCTTCATCAACGAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAGATCACTACCCTTCAACAAATTGTGTCGCCATTTGGAAAGACAGATACAGCATCGGTGCTATTTGAAGCAATTAGCTACATAAAGTTTCTGCAAGAACAAGTCCAGCTAATGATCAATCCTTACTTGAAGGATAACTCACACAAGGTAAAAGAAATGTTTGTGTTTCTTATACATGTCTCTGTATTTTTATTTGTAATAACAATTAAACCAGATCAATTCCAGGATCCATGGGGAAGATTGGACAGAAAAGATAAGGGAGACGCAATGTTTGAACTTAGAAGCAGAGGACTTTGTTTAGTTCCTACTTCATGCACACCTCAAGTTTACAGAGACAACAGTGGACCAGATTACTGGAGACCAGCATACCGAGGATGTTTATATAGGTGA 1581 0.3966 MAEDCVGSTDATSCSTPLNWWDIHASSLSSWSNTNNSWINQPDPNSSSSCEDEISVSTSFTNAFNHSSLTVESSRRLVEPSLSSNELTGVNASADNQLWSHVLLGVGGNGELHNNQVIGENFLDTLSSKSMTKAMFEPACDYLKKLDTSWTYNNSTSFNSFEKHLNGFSEAMIENERSTKLSNLVSTWSIAPPATEVNSHFEPQTFSFDHYSQSDSCHIKPRFGSSTSSAFGEENRQCGKFPCYGLDMKVKQENQAREVTGALFGRPYNSMVYQQGFHSPLVGDNISKLFYGTPNTSSGINFFSDVIPLNNRLGRPLIGIHGHKPSVNSFNLSKLKKQGLQTSSPTRTNCETDQGSAGESKKKRSEDSSESILKKPKQDTSTASSTKVQAPKVKLGDKITTLQQIVSPFGKTDTASVLFEAISYIKFLQEQVQLMINPYLKDNSHKVKEMFVFLIHVSVFLFVITIKPDQFQDPWGRLDRKDKGDAMFELRSRGLCLVPTSCTPQVYRDNSGPDYWRPAYRGCLYR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01880 526 Gene3D - 392 450 IPR036638 GO:0046983
Bach4g01880 526 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 394 439 IPR036638 GO:0046983
Bach4g01880 526 MobiDBLite consensus disorder prediction 375 389 - -
Bach4g01880 526 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 131 505 - -
Bach4g01880 526 MobiDBLite consensus disorder prediction 356 374 - -
Bach4g01880 526 MobiDBLite consensus disorder prediction 336 355 - -
Bach4g01880 526 CDD bHLH_AtbHLH_like 394 435 IPR045239 -
Bach4g01880 526 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 379 428 IPR011598 GO:0046983
Bach4g01880 526 MobiDBLite consensus disorder prediction 336 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01880 Bach-Chr4 18369750 18373128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01880 14 526 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 30.612 6.31e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01880 - - gmx:100527800 624.009