Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01874 ATGTTTTGTTGTTTGGCATTTTTCAAGATAACAGATCCAGATGCAGAGGTAATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTCATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTAAAGCAAAAGACCAACAAAGAGCCAAAGAAAAAGGTTTATCTGTGTCCTGAGCCCACATGTGTACACCATGACCCTTCAAGAGCTCTTGGTGACCTCACTGGGATTAAGAAGCACTATTCTCGCAAACACGGTGAGAAGAAGTGGAAGTGCGAAAAATGCTCCAAAAGATATGCTGTTCAATCTGACTGGAAAGCACATTCCAAAACCTGTGGCACTAGAGAGTATAGATGTGATTGTGGCACTCTCTTCTCAAGGAGGGACAGTTTTATCACTCATAGGGCTTTTTGTGATGCACTAGCACAAGAGAGTGCAAGACATCCTACCAACTTGAACGCCATGGGAGCTCATCTATATAGCTCCAACCACATGACCTTAGGGTTATCTCAAATGGGTTCCCAGATCCCCCAACTGCAAAATCAAAACCAGGCGACCACTAACAATATTTTGCGCATTGGTGGTGGTGGGGCAGCAAAATTTGAGCATTTAATCTCACCCTCAAATCAATCTTCATTTGGAGCAATTCCCTCTTCAGCTTTCTTCTTGAGTACTGATCCAACTCAAGCATTTCAAGAGCAACAATCCCCACAAGGGCCATTCTCAAGCAAACAACTACAAGGCCTTATGCAACTTCCTGATCTCCAAGGCAACACCAATAACTCCAATGCCAATCTATTTAACCTTAGCTTCTTCCCTAATAGCAATAGCACTGCAAGCAGCATAATCCACGACCAATACAACAATGCCAGTGGTGGTGGTGGCGGTAACCAAGGGACAACTCTCTTCTCTAATAGCCATGTAAGCGATCAAGTTGGAGCAGGTCTGCCCTCACTCTTCAGCAATCAAGTACAACATGAAAACATGTCCCCACATATGTCTGCAACGGCATTGCTTCAGAAAGCTGCTCAAATGGGTTCAACCACAAGCACCAACGGCTCTAGTTTACTAAGAGGAATAGGTAGTTCTTCAACCAATAGTGCCAAATCTGATAGGCAAGTTTTGCCTAATAGTCTTGCTGCTTTTGGAGGTGAAAGTAGGGCAGAAAGTGTAAGATCAAGCATGGAAAAGGAGCAGCACCATCTCCAAGGGCTAATGAACTCTCTTGCCAATGGTAACACTTCCATTTATGGGAATGTACAAGAGAACAACCTTGGCAGGTTTCACAATATGGATGAGTCATCTAAGTTGCACCAAAATCTGGGTGTGACCTTTGGAGGGTCTGATAAGTTAACGTTGGATTTTCTTGGTGTTGGAGGAATGGTCAGAAACATGAATGGTGGATTTTCTCAGAGAGAACAACAACAACATGGCATCAATATGAGTTCTTTGGATTCTGAACCCAAGTCAACATCACAAGTTAGCCAACCTTTTGGGAGCAGAACATTGTAA 1563 0.4389 MFCCLAFFKITDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKKKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTNLNAMGAHLYSSNHMTLGLSQMGSQIPQLQNQNQATTNNILRIGGGGAAKFEHLISPSNQSSFGAIPSSAFFLSTDPTQAFQEQQSPQGPFSSKQLQGLMQLPDLQGNTNNSNANLFNLSFFPNSNSTASSIIHDQYNNASGGGGGNQGTTLFSNSHVSDQVGAGLPSLFSNQVQHENMSPHMSATALLQKAAQMGSTTSTNGSSLLRGIGSSSTNSAKSDRQVLPNSLAAFGGESRAESVRSSMEKEQHHLQGLMNSLANGNTSIYGNVQENNLGRFHNMDESSKLHQNLGVTFGGSDKLTLDFLGVGGMVRNMNGGFSQREQQQHGINMSSLDSEPKSTSQVSQPFGSRTL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01874 520 Gene3D Classic Zinc Finger 11 78 - -
Bach4g01874 520 SUPERFAMILY beta-beta-alpha zinc fingers 30 127 IPR036236 -
Bach4g01874 520 Gene3D Classic Zinc Finger 85 164 - -
Bach4g01874 520 MobiDBLite consensus disorder prediction 488 520 - -
Bach4g01874 520 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 53 IPR013087 -
Bach4g01874 520 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 11 494 IPR031140 -
Bach4g01874 520 SMART c2h2final6 72 102 IPR013087 -
Bach4g01874 520 SMART c2h2final6 31 53 IPR013087 -
Bach4g01874 520 SMART c2h2final6 107 127 IPR013087 -
Bach4g01874 520 Pfam Zinc-finger double-stranded RNA-binding 31 53 IPR022755 -
Bach4g01874 520 MobiDBLite consensus disorder prediction 361 390 - -
Bach4g01874 520 FunFam protein indeterminate-domain 12-like 10 78 - -
Bach4g01874 520 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Bach4g01874 520 FunFam protein indeterminate-domain 5, chloroplastic-like 85 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01874 Bach-Chr4 18189078 18192234 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01874 9 484 IDZ Gene Family AT2G02070 48.362 1.56e-125 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g01874 zf-C2H2_jaz 3.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01874 K25870 - tcc:18609936 660.603