Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01871 ATGATAACAGATCCAGATGCGGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTAAAGCAGAAGACTACAAAAGAGCCAAAGAGAAAGGTTTATCTGTGCCCTGAACCCACATGCGTACACCATGACCCTTCAAGAGCTCTCGGTGACCTCACTGGGATTAAGAAGCACTATTCTCGCAAACATGGTGAGAAGAAGTGGAAGTGCGACAAGTGCTCAAAGAAATATGCTGTTCAGTCTGATTGGAAAGCTCATTCAAAGACTTGTGGAACGAGGGAATACAGGTGCGATTGTGGCACTCTCTTCTCCAGGCGAGATAGTTTCATCACTCATAGAGCTTTTTGTGATGCATTGTCTCAAGAGAGTGCAAGACAACCACCAAGTCTGAGCAGCACCATAGGCAACCACCTCTATGGTGGCAGTAACATGGGCTTAGGTTTATCCAATGTGGGTGCTCAGATCTCTTCCATTCATGATCAGAACAACCACTCTAGTGACCTTCTCCGACTTGGCGGCGGTCGCACCGGACAATTTGATCACATTCTCCCACCTTCCTTGGGCTCCTCCTCAACCTTCAGACCTCCACAACAAACCATGCCTTCAGCTCCAGCATTCTTCATGCAAGAACCAAACCAAACATTGGTGCAAAACAAGTCATTCCATGGACTAATGCAGTTTTCTGACCTTCAAAACACCGCCGCCGCCGGCACCAACAACAGCAACTCTCCAACTGGCGCCACCGCCAACAACACCAACCTCTTCAACCTTCCTTTCCTCTACAACTCCAACGGCGGCGCTGGCAGCAACCCCAACTCTTTCTCTGAACACTTCACCAATGGAAGTGGCTCCGGCACAGGCACCGGCAACAATGAAGGGTCCAGCTTCTTCTCCGGAGGCTCCATAATGGGAAACCAAACGAGCTCCACTGCTCCTTCACTCTTCAGCACATCTCTCCAAAACCACACCCCTGTCCCTGTAATGTCAGCCACCGCGCTGCTTCAGAAAGCTGCTCAAATAGGTGCAAGCTCCAGCAACAACAACGGCACAATTTCATTGCTCAGAAGCTTCGGAAGCTCCTCCTCAAGCAGTGGTGGTGGTGGAGGCTCAAACTCAAAACCAGATCACAAATCACCACCACTCCTTAATGCTTCTTCAAACTACACCACCATGTTCGCCAGTGCAACTGATCAAAACAACAACCTCCATGACCTGATGAACTCCTTCGCGAGTGGCAGCTTCGAAAGTGGCTCTGTAGGGTTAAGTGGCTTTGAAGCCTCTGAAAGGCTCAGCACCAGAGATTTTCTCGGCGTTGGACAAATAGTGAGGACCATGAGTGGAAACATTTCACAAAGAGAACAACAGCAGCAGAACCAGCAACAAGGGTTTAACCTGAGCTCATTGGAGACAGAGAGAAATGCTGCTGCGCGACCAGCACATTCTTTTGGAGGTGGTGGAGGGAATTTTCAGTGA 1566 0.4943 MITDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALSQESARQPPSLSSTIGNHLYGGSNMGLGLSNVGAQISSIHDQNNHSSDLLRLGGGRTGQFDHILPPSLGSSSTFRPPQQTMPSAPAFFMQEPNQTLVQNKSFHGLMQFSDLQNTAAAGTNNSNSPTGATANNTNLFNLPFLYNSNGGAGSNPNSFSEHFTNGSGSGTGTGNNEGSSFFSGGSIMGNQTSSTAPSLFSTSLQNHTPVPVMSATALLQKAAQIGASSSNNNGTISLLRSFGSSSSSSGGGGGSNSKPDHKSPPLLNASSNYTTMFASATDQNNNLHDLMNSFASGSFESGSVGLSGFEASERLSTRDFLGVGQIVRTMSGNISQREQQQQNQQQGFNLSSLETERNAAARPAHSFGGGGGNFQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01871 521 SUPERFAMILY beta-beta-alpha zinc fingers 22 119 IPR036236 -
Bach4g01871 521 MobiDBLite consensus disorder prediction 303 334 - -
Bach4g01871 521 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Bach4g01871 521 MobiDBLite consensus disorder prediction 501 521 - -
Bach4g01871 521 FunFam protein indeterminate-domain 12-like 2 70 - -
Bach4g01871 521 Gene3D Classic Zinc Finger 3 71 - -
Bach4g01871 521 FunFam protein indeterminate-domain 5, chloroplastic-like 77 156 - -
Bach4g01871 521 Pfam Zinc-finger double-stranded RNA-binding 23 45 IPR022755 -
Bach4g01871 521 Gene3D Classic Zinc Finger 77 156 - -
Bach4g01871 521 MobiDBLite consensus disorder prediction 388 416 - -
Bach4g01871 521 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 45 IPR013087 -
Bach4g01871 521 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 4 489 IPR031140 -
Bach4g01871 521 SMART c2h2final6 99 119 IPR013087 -
Bach4g01871 521 SMART c2h2final6 64 94 IPR013087 -
Bach4g01871 521 SMART c2h2final6 23 45 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01871 Bach-Chr4 18014423 18017903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01871 6 478 IDZ Gene Family AT2G02070 48.524 9.73e-128 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g01871 zf-C2H2_jaz 3.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01871 K25870 - tcc:18609937 577.785