Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01853 ATGGGAAGAGTAACTGCTGCTGAAAAGAATGAAATTTTAAAGAGAGTGAATGCTTTCCGATCTAAAAATCCATTTTTCATAGTAATCATTCAGCCATCATATGTTTCCAACAAGGGTCTATTGAATATACCATTAAAATTTGCAGATGAGCATTTAGGGAAAAAACAAGGTACTTTGATCCTTGAAGTCTCGGAGGGGAGAACTTGGTCTGCTATATATAATGGTAAAAATATACATTCTGGCTGGCACAAATTTGCCAGAGATAATAATCTAAAAGTGGGAGATGCTTGTGTTTTTGAGATGACTAATAGCGTTGAGCTTACAGTCAAAGTTCTGATTTACCGAGTTGCTGAAGATCCAAGTTGCTCATTATCACAAGGCGAAATGAATGCTCAAAGAGCAAACAGAGCTCTTGGAAAAGCTGAAAAGTTTGACTCAAACAATCCCTTTTTCAGAGTCTCTATTAGGCCTTCTCATTTGCAGCGTAGCAAACCATATGTACCAGCAGCCTTCTACAAGATGTGTACTACAGAGAGGGAGAAGAATATATTGATACAAGTGGGTGAACGATCATGGCATGCAAAGTTGATACGTTATCCTTGTCGATCATCTGCCAAGATATCTGCCGGTTGGCCTGCATTTGCAAGGGAAAACAACTTGCAACGTGGAGATATTTGCATCTTTGAGCTGATTAATAGAGATGTGCTGAAAGCACATATTTTCCGTTGCCGCAGTTAG 738 0.3902 MGRVTAAEKNEILKRVNAFRSKNPFFIVIIQPSYVSNKGLLNIPLKFADEHLGKKQGTLILEVSEGRTWSAIYNGKNIHSGWHKFARDNNLKVGDACVFEMTNSVELTVKVLIYRVAEDPSCSLSQGEMNAQRANRALGKAEKFDSNNPFFRVSIRPSHLQRSKPYVPAAFYKMCTTEREKNILIQVGERSWHAKLIRYPCRSSAKISAGWPAFARENNLQRGDICIFELINRDVLKAHIFRCRS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01853 245 SUPERFAMILY DNA-binding pseudobarrel domain 21 119 IPR015300 -
Bach4g01853 245 Gene3D - 129 244 IPR015300 -
Bach4g01853 245 Gene3D - 3 119 IPR015300 -
Bach4g01853 245 ProSiteProfiles B3 DNA-binding domain profile. 150 244 IPR003340 GO:0003677
Bach4g01853 245 CDD B3_DNA 24 115 IPR003340 GO:0003677
Bach4g01853 245 SMART B3_2 26 117 IPR003340 GO:0003677
Bach4g01853 245 SMART B3_2 150 244 IPR003340 GO:0003677
Bach4g01853 245 SUPERFAMILY DNA-binding pseudobarrel domain 144 242 IPR015300 -
Bach4g01853 245 Pfam B3 DNA binding domain 150 242 IPR003340 GO:0003677
Bach4g01853 245 Pfam B3 DNA binding domain 26 115 IPR003340 GO:0003677
Bach4g01853 245 CDD B3_DNA 149 242 IPR003340 GO:0003677
Bach4g01853 245 ProSiteProfiles B3 DNA-binding domain profile. 26 115 IPR003340 GO:0003677
Bach4g01853 245 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 121 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01853 Bach-Chr4 17624854 17626355 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01853 121 243 REM Transcription Factor Family AT1G49480 37.302 1.46e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach4g01853 B3 8.5e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01853 - - qlo:115950332 192.2