Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01847 ATGTCTTCCTTTCACAACCCTCTAAACTTCTTCAGAATTATTCTTCCAATTACCCTTGAGAAAGGAGAGCTTCCACTGCCGAAAGGATTTGGGAGGAAATATGGGAAAACTTTATCAAACATGGTATTGATTAAGCTGCCAGATGGAGTTAAATGGAAAATGAATTGGACAAAGCATGATGGTCAATTCTGGCTTGAGAAGGGTTGGAAAGAATTTGTGAAGTTCTATTCCATTTCTATTGGGTATTTTTTGGTCTTCAAATATGAAGGAAATTCCCATTTCCAAGTGCATATATTCGATACCAGCTGTCTAGAAATAGCCTATCCTGTTCTATTTGGCACTGATGATGGTGATGATGATGAAAGCAACAAAGGCGATTCTGTTGAATTCATTCATGAATGCAACAAAGCAAGACCAGAATCACCAGTACATTGTTCTAGACCGCACAAAATAGCTAAAACCATCCCAGTTGTAGAAACTGCTTGCTCTGATCGTCATAAAGCTGAAAGCTCAAGAATTGGCAGGAAAAGGCTTGAGAAAATTAAGACCCATTTGGACATTGATGCTGCAAAGAAAATTTTCATAGGCAATGAGGAAGGCACTTTTAGCTTTGGAAAACATTCGAAATGTGAGTCCAACAGAAACAAGGAACCATTATCATTTCAAAAGCTATTCTCTTTTGATGTTGAAATGCATCCCACATACCTCACAACAAATTGTTTGCATTTTCCCCGCAATCATGGCATGAATGATCTAAACAAGAATGGGGGAACTGTTATCCTTCAAGTCTCTGATGGGAAAACTTGGCCTGTCTCATACAAGTTCAGCAATGGTAGAGGCACACTTACTAATGGTTGGTTGTCATTTGTGAGGGCCAACAATCTAAAAAAGGGAGATGTTTGTAGTTTTAAGATGATTGAGAGTAATGGTGTTTCATTCATAGTTTCTATCCACCGAGCCAATGAAGTATCGATTACTCCATTGTCACAAGGCAATAGGGGAGGCAGTTTTAACTCTGGGAAACATTCAGAATGTGAGACCAATAGAAGCAAGATGCCATTATCATTTAAAAAGCCAGTGTCTTTTGTTATTGAAATGCATCCCTCGTACCTCAGAACAAATTGCTTGCATGTTCCCCGCAAACATGGCATGAACAATCTAAGCAAGAAGAATGAAGGAACTGTTATCCTTCAACTCTTTGATGGGAAAACTTGGCCTGTCTCATACAAGTTCAGTAATGGCAGAGGCAGACTTACTAATGGTTGGTTATCATTTGTGAGAGCCAACAATCTTAAAGTTGGAGATGTTTGTATTTTTAAGATGATTGAGAGTAATGGTGTTTCATTCATAGTTTCTATCCTGCGAGCCAATGAAGTATCGACTGCTCCATTGTCACAAGGAGAGTGGGCTACTGACAAGCCTTCATCAACCTTTTATGAACAGGCTCCTCTGAGTATGCATGAAAAATCTGAAGTTCAGAAAGCTTGCAGACAATTTGATTCAGACGTTGGTTTTTCTATCTTCATGAGGAGTTGTCTTTTGGAAAATGCAAGGCCGAGCATACCAGTGGATTTTATCAGGAGGCATGTCAGACGTAATAAGCAGTATGTGACCTTGCAAATTGGGAGAAAATTGTGCCACGTGAAGCTGGTTTATTATCCAATTAGATCATATGCTAGGTTTACCACTGGTTGGTCTTCATTTGTTAGAGAATTTGACTTGGAGGCTGGGGATGTTTGTCATTTTCAGCTGATAGATGAAGATGAAGGTAAACTAGTTCTAAAGGTTTCAGTTGAAAAACACCTTGAAGAAGAACTTGGAATGTTTGGAGCAGATGATGAGGATTCTTACCGGCCTGTTATTGCTGACTGCAGATGCTTTATGGGTCATCTGAATTAA 1899 0.3918 MSSFHNPLNFFRIILPITLEKGELPLPKGFGRKYGKTLSNMVLIKLPDGVKWKMNWTKHDGQFWLEKGWKEFVKFYSISIGYFLVFKYEGNSHFQVHIFDTSCLEIAYPVLFGTDDGDDDESNKGDSVEFIHECNKARPESPVHCSRPHKIAKTIPVVETACSDRHKAESSRIGRKRLEKIKTHLDIDAAKKIFIGNEEGTFSFGKHSKCESNRNKEPLSFQKLFSFDVEMHPTYLTTNCLHFPRNHGMNDLNKNGGTVILQVSDGKTWPVSYKFSNGRGTLTNGWLSFVRANNLKKGDVCSFKMIESNGVSFIVSIHRANEVSITPLSQGNRGGSFNSGKHSECETNRSKMPLSFKKPVSFVIEMHPSYLRTNCLHVPRKHGMNNLSKKNEGTVILQLFDGKTWPVSYKFSNGRGRLTNGWLSFVRANNLKVGDVCIFKMIESNGVSFIVSILRANEVSTAPLSQGEWATDKPSSTFYEQAPLSMHEKSEVQKACRQFDSDVGFSIFMRSCLLENARPSIPVDFIRRHVRRNKQYVTLQIGRKLCHVKLVYYPIRSYARFTTGWSSFVREFDLEAGDVCHFQLIDEDEGKLVLKVSVEKHLEEELGMFGADDEDSYRPVIADCRCFMGHLN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01847 632 Gene3D - 5 103 IPR015300 -
Bach4g01847 632 SUPERFAMILY DNA-binding pseudobarrel domain 7 102 IPR015300 -
Bach4g01847 632 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
Bach4g01847 632 CDD B3_DNA 10 100 IPR003340 GO:0003677
Bach4g01847 632 SUPERFAMILY DNA-binding pseudobarrel domain 508 589 IPR015300 -
Bach4g01847 632 CDD B3_DNA 505 600 IPR003340 GO:0003677
Bach4g01847 632 ProSiteProfiles B3 DNA-binding domain profile. 361 457 IPR003340 GO:0003677
Bach4g01847 632 ProSiteProfiles B3 DNA-binding domain profile. 226 321 IPR003340 GO:0003677
Bach4g01847 632 PANTHER B3 DOMAIN-CONTAINING 382 589 - -
Bach4g01847 632 CDD B3_DNA 361 455 IPR003340 GO:0003677
Bach4g01847 632 Pfam B3 DNA binding domain 506 596 IPR003340 GO:0003677
Bach4g01847 632 Pfam B3 DNA binding domain 363 456 IPR003340 GO:0003677
Bach4g01847 632 Pfam B3 DNA binding domain 19 101 IPR003340 GO:0003677
Bach4g01847 632 Pfam B3 DNA binding domain 229 320 IPR003340 GO:0003677
Bach4g01847 632 SMART B3_2 505 599 IPR003340 GO:0003677
Bach4g01847 632 SMART B3_2 362 457 IPR003340 GO:0003677
Bach4g01847 632 SMART B3_2 10 102 IPR003340 GO:0003677
Bach4g01847 632 SMART B3_2 227 321 IPR003340 GO:0003677
Bach4g01847 632 CDD B3_DNA 225 319 IPR003340 GO:0003677
Bach4g01847 632 SUPERFAMILY DNA-binding pseudobarrel domain 224 321 IPR015300 -
Bach4g01847 632 Gene3D - 206 323 IPR015300 -
Bach4g01847 632 Gene3D - 484 602 IPR015300 -
Bach4g01847 632 Gene3D - 342 459 IPR015300 -
Bach4g01847 632 ProSiteProfiles B3 DNA-binding domain profile. 504 600 IPR003340 GO:0003677
Bach4g01847 632 SUPERFAMILY DNA-binding pseudobarrel domain 359 457 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01847 Bach-Chr4 17387210 17390392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01847 362 459 B3 DNA Binding Superfamily AT3G18990 32.323 1.73e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach4g01847 B3 3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01847 - - gra:105775884 258.455