Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01822 ATGTTGAATGTGGATGTGCTTGGCAACAAGAAGAGGAAGAGATGTGGGAGGGTTTTCAAGTTCAAGAATTTTGGCGAGCCTGGTTACCCAGTTGAGTTTAATGGGCCATTTCGTGAGAATGTGAATGCACTGCTTGAATTTTCAAATTTGGAGACCAATTTAGGATTGGGAATGACCATTTGGTCGTTCCAACTTGAAGTTCATCGCCACCCACCTTTCCATATTTTGCTCTTTGTGATAGAAGAACCAATCGAGTCCTCACTCTCCCCTCACTGCAAGAATTGTCAATATATAGGCTGGGGGAGACATCTCATTTGCAATAAGAAGTATCACTTTCTGCTGCCTTCAAAAGAGACGTTAGCTGCTTGTCTGAGCTGTGAAGGCCTGTGTGATACAGCTTCTCCTGGAATGAATAACGGTAAGTCCAAATTAATAGAATTACAGGGCCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGGCATTTGCTGTGTATCAATGGCGTGGAAATGGGTTCTGATTTGGCTGGACACCAGATCATGGAGTTTTGGGATCGTTTGTGCGCTGGATTGCAAGCAAGGAAAGTGAGTTTGAATGACATTTCACAAAAAAGAGGCCTGGAGCTGAGACTTCTCAATGGAATAGCATATAGTGAGCCATGGTTTGGCAGATGGGGATACAAATTTGGGCGAGGATCCTTTGGTGTCACTCAACCCACATACCAAAAGGCTATTCAGGCAATAAGAAGCATGCCATTATACTTGATAATACACCACATAAGCACTTCCAACCATGACATTCCCGTAATATTCTCAAGGTACCAAACACTGTCAGATCAGTCCCTAGTGACTCTTGGTGACCTATTTCATTTCATGTTAGAGCTCAAGTCACGCCTTCCACACGAAAGCTCTTTTGATTCTTGTAACACCAATGTCTTAGCTGAAACAAATTGTCGTTGGTCATCTAAACGAATCGAAATGGCAACTAAGGTTATAGTTGAGGCCTTAAAAAGAACTGAATACAAGTGGATTTCAAGGCAAGAAGTTAGAGATGCTGCTCGCGCTTACATCGGTGACACGGGATTGCTTGATTTTGTGCTGAAATCATTGGGAAATCATGTTGTGGGTAACTATTTGATCCGCCGAAGCTTGAATCCAGTGACAAAAGTCTTGGAGTATTGCTTAGAAGACATTTCTGCTGCCTTCCCTAGTCAAGAAGGTTTGATAATAGGCAATAAAGCCAAGGACAGGTTCAAGATTACAAGGACACAACTCATGAAGGACATGCTTTATTTGTATAAGTACATTCTCATAGACCCAAAACCAACACCAAGATCAGGGATTCTCTCAGCTATACCTTTGGCAGCAGGGATAATTCTTGACACCAAGTACCTTATCAAAGAATACTTTGGGGAGCTTCCTTTCCAAGTTGAGCTAGACTTGGAAGGGAAACTCAGCCTCTATTGTACAATCATGTTGAGGAACAACACAGGCCATGAGGGTTATCTAGATAGGGAAATGCCACCTTATGAGTGCATCACATTGAAAAGCAGTGCCACCATCAATGACTTAAAGCTAGAAGTTGAAAGGAATTTCAGGGACATCTATTGGGGATTGAAAGGTTTCGTTGTGGAATCAATTGCCAATTTGAATGCCAATGGGTCAGATTTGGTTTTTGGGATAATAGAAGTGGGTCGAAAACTTGTCATTGAGGGTTGGAGCTATGGCATAGGAATCATCAATATGTCTGAAAGTGATCCTAGTAATGGGATGGTGGAGTGCACTTGTGGAACTCAGGAAGATGATGGGGAGAGGATGGTTTCGTGTGATATATGTGAGATTTTGCAGCATACTCGGTGTGTTCGGATTCCAAATGATGAAGAAATTCCTCACATATTTTTGTGCAAAAGGTGTGAGCAAGAAATTGTTCAGTTCCCTTCGTTGCCATAA 1953 0.4214 MLNVDVLGNKKRKRCGRVFKFKNFGEPGYPVEFNGPFRENVNALLEFSNLETNLGLGMTIWSFQLEVHRHPPFHILLFVIEEPIESSLSPHCKNCQYIGWGRHLICNKKYHFLLPSKETLAACLSCEGLCDTASPGMNNGKSKLIELQGHMMHGVFHSNGFGHLLCINGVEMGSDLAGHQIMEFWDRLCAGLQARKVSLNDISQKRGLELRLLNGIAYSEPWFGRWGYKFGRGSFGVTQPTYQKAIQAIRSMPLYLIIHHISTSNHDIPVIFSRYQTLSDQSLVTLGDLFHFMLELKSRLPHESSFDSCNTNVLAETNCRWSSKRIEMATKVIVEALKRTEYKWISRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLIRRSLNPVTKVLEYCLEDISAAFPSQEGLIIGNKAKDRFKITRTQLMKDMLYLYKYILIDPKPTPRSGILSAIPLAAGIILDTKYLIKEYFGELPFQVELDLEGKLSLYCTIMLRNNTGHEGYLDREMPPYECITLKSSATINDLKLEVERNFRDIYWGLKGFVVESIANLNANGSDLVFGIIEVGRKLVIEGWSYGIGIINMSESDPSNGMVECTCGTQEDDGERMVSCDICEILQHTRCVRIPNDEEIPHIFLCKRCEQEIVQFPSLP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01822 650 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 646 - -
Bach4g01822 650 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 581 644 IPR013083 -
Bach4g01822 650 Pfam PHD-finger 595 641 IPR019787 -
Bach4g01822 650 CDD PHD_MMD1_like 594 639 - -
Bach4g01822 650 ProSitePatterns Zinc finger PHD-type signature. 595 639 IPR019786 -
Bach4g01822 650 SMART PHD_3 594 640 IPR001965 -
Bach4g01822 650 SUPERFAMILY FYVE/PHD zinc finger 586 642 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01822 Bach-Chr4 16541612 16545088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01822 10 650 PHD Transcription Factor Family AT5G22260 51.796 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach4g01822 PHD 6.7e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01822 K26271 - gmx:100780210 1053.51