Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01762 ATGCTCGCTTCCAAGCGTTCTGCCGGACGGCGATTCACGTTTCAGGAGAAAGAGTATGTTATCGAGGAGTTGACGGCTGAGAGCTTCAATGGCGTCGATATTGCTCTGTTCAGTGCAGGTGGGTTGATTAGCAGAGAGTTTGGACCCATTGCTGTTGATAAAGGGACTATTGTGGTGGATAACAGCTCGGTATTTCAGATGGACGAGAAGGTGCCGCTTGTGATTCCAGAAGTGAATCCTGAGGCAATGGAGAATATTAAGCTTGGAAAGGGAAAGGGGGCTCTTATAGCTAACCCGAATTGCTCTACAATTATATGCTTAGTGGCCGCTACTCCTCTTCATCGACGTGCCAAGCTTTGGCGTAAGAAGCAGTCTGATGTTTTGAGGTTTTTGCAAAGAGTCAGGTGCTTGAAGTACCGTCAGCATCCATCCATTGTCCGATTGACAAGGCCCACCAACCCTGATAAGGCACGTCGCCTGGGTTACAAGGCAAAGCAGGGTAATGTGGTCTACCGCGTTCGTGTTAGGAAAGGTGGGAGGAAGAGGCCAGTTCCAAAGGGTATTGTGTATGGGAAGCCCACAAATCAAGGTGTTGCCCAGCTGAAATTCCAACGCAGCAAAAGATCAGTCGCTGAAGAACGTGCTGGGCGGAAGTTGGGTGGATTGAGGGTCCTCAATTCCTACTGGGTGAATGAGTCCACATGCACAGGGAACTTCGAGGGCTCACTTTTGCTGGGAAGGAAATTAGGGCTTAGTTGGAAGGGGACATCTCTACCGCAAAGCACTTCCGTCTCGCAGAGCAACCTGAAAGAGAAACAACACCATTTCCCGTTGTACTACCGTTAA 846 0.4953 MLASKRSAGRRFTFQEKEYVIEELTAESFNGVDIALFSAGGLISREFGPIAVDKGTIVVDNSSVFQMDEKVPLVIPEVNPEAMENIKLGKGKGALIANPNCSTIICLVAATPLHRRAKLWRKKQSDVLRFLQRVRCLKYRQHPSIVRLTRPTNPDKARRLGYKAKQGNVVYRVRVRKGGRKRPVPKGIVYGKPTNQGVAQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNESTCTGNFEGSLLLGRKLGLSWKGTSLPQSTSVSQSNLKEKQHHFPLYYR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01762 281 Gene3D Ribosomal protein l15e 119 244 IPR024794 GO:0003735|GO:0005840
Bach4g01762 281 PANTHER RIBOSOMAL PROTEIN L15 117 235 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bach4g01762 281 Gene3D - 1 118 - -
Bach4g01762 281 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 117 240 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bach4g01762 281 Pfam Semialdehyde dehydrogenase, NAD binding domain 2 85 IPR000534 GO:0016620|GO:0051287
Bach4g01762 281 Pfam Ribosomal L15 118 235 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bach4g01762 281 SMART Ribosomal_L15e_2 117 270 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bach4g01762 281 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 117 IPR036291 -
Bach4g01762 281 SMART Semialdhyde_dh_3 1 86 IPR000534 GO:0016620|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01762 Bach-Chr4 15235700 15245303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01762 117 240 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 83.871 2.65e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01762 K02877 K00133 qsa:O6P43_013092 209.534