Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01747 AATTCTTTCCATTTTCAAGGAGATGATAGGGTTTCTGCATTCAATTTCCCGATTATTTAGGCGCGCTATGTGAGTTTAGGCGCCTAACAATAGCTCTCCAAGAGTAAATATACCGTGTGTAGTTTGCTCAATGGCTGCTTTGCAGAGTGTGACACAGTCCAACATGAGCACCAGTGGAAACAGCTATAGCTCCAGCAAGGATGGCGCTGCTGCCACTCCTGCTTCTGAAAACATGGTTTCTAATCAGTTCCCGGCTGGTCTCAGGGTTCTGGTGGTGGATGACGATGCCACCACCTTGAAAATTATTGAACAAATGTCTCGTCGATGTCGTTATAACGCTACCACTTGTTGTCAAGCTACTGTTGCTTTGAATCTTCTGCGGGAGAAGAAAGGCTGTTTTGATGTGGTACTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGCTCGAAATGGATCTTCCTGTTATTATGATGTCTGCTGATAGTAGAACAAGTGCTGTCATGAAGGGAATTAGACATGGAGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAACTGAAGAATATATGGCAGCATGTTGTTAGGAAAAAATGGAATGACAATAAAGAACATGAAAATTCTGGCAGCTTGGATGACAATGATCGGACTAAACAAGGAAATGAAGAAGCTGAATATACATCTTCTGTTATTGATGCAGCAGAAGGAATAGTTAGAGCTCATAAAAGGAGGAGCACTTCAAAGGAAGATGATGATGGTGACCTTGAGAATGATGATCCATCCACAACAAAGAAGCCCCGTGTTGTGTGGTCAGTGGAATTGCATCAACAGTTTGTCAGTGCTGTGAACCAACTCGGGCTTGACAAAGCCGTGCCAAAGAGAATTCTTGAATTGATGAATGTGCCTGGTTTGACTAGAGAAAATGTTGCCAGCCATTTGCAGAAATTTAGGCTTTATTTGAAGAGACTAAGTGGAGTTGCACAGCAACAAAACTCAAATTCTGGGCCTGTAGATGCCAACGTCAAACTGAGTGGAGGACTTGGAAGAGTTGACATTCAAACTTTGGCTGCTACTGGCCAAGTTCCTCCACAGACACTAGCTGCCCTTCATGCAGAGCTCTATGGCCATCCAGCTGGTAACGTAGTTCCAACAGTGGACCAGACTGCTATCCTGCAAGCATCCATCCATGGGTCCAAGAATTACCCTGCAGAACATGGTGTGGTGTATGGTCAGGTGCTAGTAAAATGTCCTTCCAACATTGCCAAAAGTTTTCCTCAGGGCGTCATGACTGTAGATGATGCGTCTCCAGCATATGGAGCATGGCCACCATCTAACACTGTTGGTTCATTGGGACCCAATAGTAGTTTTGAAGGGACAGATCCCCAGAATAATAATATGATGGATATGTTGCAGCATCAGCCGCAGCAAAGACAGCTGCAGCTGCAGCAGCAGATGCAACAGCAACAGCTGCAGCAGCAGCCAACAATACATGATCAAGGTCGTTCAATTAACGTGCAACCATCTTGCTTGGTGGTCCCCTCTCAATCTTCTGCTAGTCTCCTGGCGGGAAATAGTCATGCTTCTGTCAATCAGAATTGCAGCTTTGGCAGGAATGCTTTTATTGATTACAATCTCTTTTCACCTCAATCAAATAATTCTTCGTTTAATGTTGCTCAATTCTCTGATGGGGAAATCAATGCTAGAGGTGTTCTCTCTCGGTATAATACTCCTAGCACCATTTCTCCTTCAGGTGCACCTGGTTCAATAAATATTGACAGTAGCAATACCCAGCAGCTCCAAAACTCAACTTTGACATTAGGTGCTTTGAGACAAATCCCTGCTGGCGTGCCTAATATATCTGATACCCAAGGTCTATATTGCACTGGATATGGTGATGCCCTGGATCAAGGAGCTCTTAAGAATCTTGGATTTGTTAGCAAAGGTATCTCTATTCCCAGCAGGTTTGCTGCACATGAAATTGAATCCTCAATGAATGAGTTTAGTCAAGGAAACATCTCAGTAGATAGCAATGGTAACACAGTGAAGGTGGAGCCAAATATTGATTTTATGGATAATTCAAAAGGGGGTTTCCCACCCTTGCGAAGATATTGA 2137 0.4366 MAALQSVTQSNMSTSGNSYSSSKDGAAATPASENMVSNQFPAGLRVLVVDDDATTLKIIEQMSRRCRYNATTCCQATVALNLLREKKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADSRTSAVMKGIRHGACDYLIKPVREEELKNIWQHVVRKKWNDNKEHENSGSLDDNDRTKQGNEEAEYTSSVIDAAEGIVRAHKRRSTSKEDDDGDLENDDPSTTKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNSNSGPVDANVKLSGGLGRVDIQTLAATGQVPPQTLAALHAELYGHPAGNVVPTVDQTAILQASIHGSKNYPAEHGVVYGQVLVKCPSNIAKSFPQGVMTVDDASPAYGAWPPSNTVGSLGPNSSFEGTDPQNNNMMDMLQHQPQQRQLQLQQQMQQQQLQQQPTIHDQGRSINVQPSCLVVPSQSSASLLAGNSHASVNQNCSFGRNAFIDYNLFSPQSNNSSFNVAQFSDGEINARGVLSRYNTPSTISPSGAPGSINIDSSNTQQLQNSTLTLGALRQIPAGVPNISDTQGLYCTGYGDALDQGALKNLGFVSKGISIPSRFAAHEIESSMNEFSQGNISVDSNGNTVKVEPNIDFMDNSKGGFPPLRRY 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01747 668 Gene3D - 44 179 - -
Bach4g01747 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 44 438 IPR045279 GO:0009736
Bach4g01747 668 FunFam Two-component response regulator 44 181 - -
Bach4g01747 668 ProSiteProfiles Response regulatory domain profile. 45 160 IPR001789 GO:0000160
Bach4g01747 668 Pfam Myb-like DNA-binding domain 232 280 IPR001005 -
Bach4g01747 668 MobiDBLite consensus disorder prediction 1 32 - -
Bach4g01747 668 MobiDBLite consensus disorder prediction 167 187 - -
Bach4g01747 668 NCBIfam myb-like DNA-binding domain, SHAQKYF class 230 283 IPR006447 GO:0003677
Bach4g01747 668 Gene3D - 226 289 - -
Bach4g01747 668 MobiDBLite consensus disorder prediction 167 232 - -
Bach4g01747 668 MobiDBLite consensus disorder prediction 405 431 - -
Bach4g01747 668 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Bach4g01747 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 286 IPR017930 -
Bach4g01747 668 Pfam Response regulator receiver domain 46 154 IPR001789 GO:0000160
Bach4g01747 668 CDD REC_typeB_ARR-like 46 160 - -
Bach4g01747 668 MobiDBLite consensus disorder prediction 411 431 - -
Bach4g01747 668 SUPERFAMILY CheY-like 43 167 IPR011006 -
Bach4g01747 668 SMART REC_2 44 156 IPR001789 GO:0000160
Bach4g01747 668 FunFam Two-component response regulator 226 289 - -
Bach4g01747 668 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01747 Bach-Chr4 14945185 14950201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01747 78 343 Response Regulator Gene Family AT3G16857 55.282 2.09e-94 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bach4g01747 Response_reg 1.4e-21 CL0304