Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01743 ATGGCTATGGCGAAGGAGAAAGAGAGAGAAGAGGCGTTTCGCGGGAAGAGGCAAAAATTTATAAAGAATGAAGAAAAGGGTCAAGCAGAGGAGGAAGCCGAAGAAGAGGAAGAAAGTATCGAGCTTCCTCCGGAGCCAGGGCTGTTCTTCTACCCATCAACACCCACTTCCTTCGTTGTCTCAGATGCTCTTGAACCAGATTTCCCCATCATCTATGTCAACAAGGTCTTCGAAATCTGTACTGGGTATCGTGCTGATGAGGTTCTGGGTCGCAATTGTCGGTTCTTGCAGTTTAGGGATCCTCGTGCTCAAAGGCGGCACCCTTTGGTAGATCCTGTTGTTGTATCTGAGATTAGAAGATGTCTAGAGGAAGGTATTGAGTTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGTACTCCTATAGTGAGCAGGCTAAGACTTGCACCAATTCAGGATGATGATGGAACTGTAACACATGTAATTGGTGTCCAGTTATTCTCTGAAGCAAATATAGATCTGAACAGTGTCTCATATCCAGTTTTCAAAGAAACCTGTAGTCAGGATTTTGGTAAGACTGGTGAATATTCTCCCAAGAGTGGACAAACATTATATAGCCAATACCAGGAGATGTGTGGCATTCTTCAGCTTTCTGATGAAGTCTTGGCTCACAATATACTATCACGCTTGACTCCAAGGGATGTTGCATCCATTGGGTCTGTATGCAGGAGGATTCATCAATTAACGAAGAATGAACATGTTAGAAAGATGGTATGTCAAAATGCATGGGGAAAAGAAGTGACAGGTACCCTGGAAATGATGACCAAGAAGCTAGGATGGGGTCGTCTAACTAGGGAGCTAACTACCCTTGAGGCTGTTTGTTGGAGAAAACTAACAGTTGGAGGTGCAGTGGAACCTTCACGCTGCAACTTCAGTGCTTGTGCAGCAGGAAATCGACTGGTATTATTTGGAGGTGAAGGAGTTGACATGCAACCTATGGATGATACTTTTGTTCTCAATCTTGATGCTCAAAATCCTGAATGGCGCAGAGTTAGTGTAAAGTCATCCCCACCTGGAAGGTGGGGCCACACACTCTCATGCTTAAACAGTTCTTGGTTGGTGGTTTTTGGAGGATGTGGTAAGGAAGGATTGCTCAACGATGTGTTCGTTCTTGATTTGGATGCTCAACAGCCAACATGGAAGGAAGTCTGTGGTGGAACGCCACCACTCCCTAGATCTTGGCACAGCTCTTGCACAATTGAAGGGTCTAAATTGGTAGTCTCAGGTGGGTGCACAGATGCTGGGGTACTTCTGAGTGACACATTCCTCTTGGACCTCACTAAAGATAATCCAACATGGAGAGAGATTCCAACTTCATGGGCTCCTCCTTCTCGGTTAGGGCACTCACTCTCAGTGTATGGCAGGACAAAAATTCTCATGTTTGGTGGACTTGCCAAGAGTGGACACTTGCGGCTACGATCAGGTGAGGCTTATACCATTGATCTAGAAGATGAAGAGCCCCAGTGGAGGCAGCTGGAATATAGTGCATTTACCGGAATAGGTGGTCAAAGTGCCGTGGTTCCTCCTCCGAGACTTGATCATGTTGCTGTCAGCATGCCATGTGGGAGGATCATTATCTTTGGAGGTTCCATTACTGGTCTTCACTCTCCATCCCAGCTCTTTCTTTTGGATCCTGCTGAGGAGAAGCCATCATGGAGAATCCTCAATGCTCCAGGCCAATCTCCGAAATTTGCTTGGGGACATAGCACTTGTGTGGTTGGAGGGACTAGGGTCTTGGTGTTGGGTGGGCATACTGGTGAGGAATGGATACTAAATGAGTTGCATGAGTTATGCTTAGCAAGTAGGCAGGACTATGACCTGTAA 1884 0.4618 MAMAKEKEREEAFRGKRQKFIKNEEKGQAEEEAEEEEESIELPPEPGLFFYPSTPTSFVVSDALEPDFPIIYVNKVFEICTGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPIVSRLRLAPIQDDDGTVTHVIGVQLFSEANIDLNSVSYPVFKETCSQDFGKTGEYSPKSGQTLYSQYQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIHQLTKNEHVRKMVCQNAWGKEVTGTLEMMTKKLGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAQNPEWRRVSVKSSPPGRWGHTLSCLNSSWLVVFGGCGKEGLLNDVFVLDLDAQQPTWKEVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTFLLDLTKDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEPQWRQLEYSAFTGIGGQSAVVPPPRLDHVAVSMPCGRIIIFGGSITGLHSPSQLFLLDPAEEKPSWRILNAPGQSPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDYDL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01743 627 Gene3D - 285 487 IPR015915 GO:0005515
Bach4g01743 627 FunFam Putative LOV domain-containing protein 491 623 - -
Bach4g01743 627 SUPERFAMILY PYP-like sensor domain (PAS domain) 65 165 IPR035965 -
Bach4g01743 627 Pfam Galactose oxidase, central domain 422 473 - -
Bach4g01743 627 Pfam Galactose oxidase, central domain 373 420 - -
Bach4g01743 627 ProSiteProfiles PAS repeat profile. 70 101 IPR000014 -
Bach4g01743 627 Pfam Galactose oxidase, central domain 308 358 - -
Bach4g01743 627 NCBIfam PAS domain S-box protein 68 164 IPR000014 -
Bach4g01743 627 CDD F-box_AtADO-like 213 259 - -
Bach4g01743 627 Gene3D - 215 254 - -
Bach4g01743 627 Pfam PAS domain 64 164 IPR000014 -
Bach4g01743 627 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 35 621 - -
Bach4g01743 627 CDD PAS 54 164 IPR000014 -
Bach4g01743 627 SUPERFAMILY F-box domain 206 266 IPR036047 GO:0005515
Bach4g01743 627 Gene3D PAS domain 51 176 - -
Bach4g01743 627 FunFam Putative LOV domain-containing protein 285 490 - -
Bach4g01743 627 Pfam F-box domain 214 251 IPR001810 GO:0005515
Bach4g01743 627 Gene3D - 488 621 IPR015915 GO:0005515
Bach4g01743 627 MobiDBLite consensus disorder prediction 1 45 - -
Bach4g01743 627 SUPERFAMILY Galactose oxidase, central domain 295 612 IPR011043 -
Bach4g01743 627 FunFam Adagio protein 1 47 176 - -
Bach4g01743 627 MobiDBLite consensus disorder prediction 1 28 - -
Bach4g01743 627 Pfam Kelch motif 532 579 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01743 Bach-Chr4 14673468 14676052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01743 57 166 AGC Kinase Gene Family AT5G58140 43.636 1.70e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01743 K12116 - gmx:100301889 1149.42