Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01740 ATGCTCAAGCAGCGCTTTTCCTCTGCAACCACTTTCTCGCTTTTCACTTCAGAAGCTACCAGAGAACGTTCCGCCACGACGGAGGCGCCTGAGCCCCATGCGCCGCTCCTCCGTTCCCGCCAAGGGAATACTCCCACTCTCGCCATGCTCCTTGGGCGTGCCGCGGGCCGCCGTGGCCCATCGATGCTGGTTCGAGAAACGGCCGCTCGTGAGCTCGAGGAGCGGCGAGTCGATTGGGGGTACTCGAAGCCAGTGGTGGCGCTCGACATAACGTGGAATATGGCATTCGTGATGGTGTCCATTGTCATGTTGATTTATACAGTTGATGAGAAACCCAACACGCCGATCAGGGTGTGGATCTGTGGGTATGCTCTGCAGTGCTTAATTCATGTGGTGTTGGTGTGGCTCGAGTTTAGGAGAAGGAATAGGAGGGAGTTGCGGAGCCGGCGAGCTCAGGACGTGGAGAGTCAAGGCGGCAACGTCGATGACGCCGACGAGAGTGAAGATGAGGAAATTGGAGCTGATGGCTCCGGGAATATGTCGCGCTCGGGATACACAAAAAGATGTGAATCAGTGAATACTATGGTGTCATTCTTTTGGTGGATAGTTGGCTTTTATTGGGTGGTCTCTGGCGGTGATACCCTTCTGCAAGATGCTCCACGTTTGTACTGGTTGTCTGTTGTTTTTCTGGCATTTGATGTTTTCTTTGCCATCTTTTGTGTTGTTTTGGCTTGCTTGATTGGCATTGCCCTCTGTTGTTGTTTGCCATGCATCATTGCCATTCTCTATGCTGTTGCAGGACAGGAAGGTGCATCAGACGCAGATCTCAGCGTCCTTCCAAAATATAGGTTTCAAATGTCAAGCAATGAGGAAAAGCCTGCTGGGGGAGCTGGGACAATGGTGCCCATAGAAACAAGCAGTGGCTACTTAGCAAATGATCGTGTACTTTTACCTGAGGATGCGGAATGCTGTATATGCCTCACTCCATATGAGGATGGAGCAGAGCTCCATGCTTTACCCTGCAACCATCATTTCCATTCTACGTGCATATCAAAATGGTTAAGGATGAATGCAACTTGTCCTCTCTGCAAGTTCAATATTCTTAAGGGAAACGAACAGTGGTGAACAAAAACTGAGAATACAACATGATTCTGGGTGTTTCAACTGAGATTGTCTGTATGGAGATAATACCAAGAGACGAAACTGCAGAATTTGTCCCAAGTTATTGGGTTTCGCTTTCATAGAGAAACGATAGAGGTAAGAACGAGAGAAGCTTATTTGAGCATTTATTGATAAACAAGTTTGATACTTCAATTGAGCCGCATTTTGTTGTCTATTATAGTCATTTTAAAGATATCTTTTACCCATTTTCTCTTCTCTCTGAATTTGTTCATATCAAAAAAGAAAAAGAAAAATTAGGCAGTCCAGCTTGATTTGGTTTTTCTTTTTTTTTCCTTAGTGGATGTTATGGATTTGTTTATTAATGGTTGGATAGAGAAGGGAGATTACTTGACATTGTTGTTTGTGCAAACAGTAAGTTCTAAAGCATA 1550 0.4581 MLKQRFSSATTFSLFTSEATRERSATTEAPEPHAPLLRSRQGNTPTLAMLLGRAAGRRGPSMLVRETAARELEERRVDWGYSKPVVALDITWNMAFVMVSIVMLIYTVDEKPNTPIRVWICGYALQCLIHVVLVWLEFRRRNRRELRSRRAQDVESQGGNVDDADESEDEEIGADGSGNMSRSGYTKRCESVNTMVSFFWWIVGFYWVVSGGDTLLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASDADLSVLPKYRFQMSSNEEKPAGGAGTMVPIETSSGYLANDRVLLPEDAECCICLTPYEDGAELHALPCNHHFHSTCISKWLRMNATCPLCKFNILKGNEQW 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01740 374 SMART ring_2 323 363 IPR001841 -
Bach4g01740 374 Pfam Ring finger domain 322 364 IPR001841 -
Bach4g01740 374 MobiDBLite consensus disorder prediction 151 184 - -
Bach4g01740 374 FunFam E3 ubiquitin protein ligase RIE1 303 371 - -
Bach4g01740 374 ProSiteProfiles Zinc finger RING-type profile. 323 364 IPR001841 -
Bach4g01740 374 SUPERFAMILY RING/U-box 313 368 - -
Bach4g01740 374 PANTHER TARGET OF ERK KINASE MPK-1 54 372 - -
Bach4g01740 374 MobiDBLite consensus disorder prediction 159 173 - -
Bach4g01740 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 371 IPR013083 -
Bach4g01740 374 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01740 Bach-Chr4 14634201 14638280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01740 25 373 C3H Transcription Factor Family AT1G68070 67.978 1.22e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01740 - K13148 qsa:O6P43_025918 550.821