Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01716 ATGGTTAAGCACAACAATGTTATCCCTAATGCTCACTTTCGGAAGCACTGGCAGAACTATGTGAAAACATGGTTCAATCAACCTGCTAGGAAAACTCGGAGACGACTTGTAAGACAAAAGAAAGCTGTGAAAATTTTCCCACGGCCCACTGCTGGACCACTCCGCCCTATTGTTCATGGACAGACACTGAAATATAATATGAAAGTGAGGGCTGGCAGGGGCTTCTCTGTAGAAGAATTGAAGGCTGCTGGTATATCAAAGAAAAGTGCACCTACTATTGGGATAGCTATTGATCATCGTCGGAAGAACCATTCTTTGGAGAGTCTTCAGGCTAATGTGCAGAGGTTGAAGACATACAAGGCTAAGTTAGTTGTCTTCCCAAGACGTGCTCGCAAAGTTAAGGCTGGTGATTCTGCTCCAGAGGAGCTTGCTTCAGCGACTCAAGTCCAGGGTTCTTATATGCCTATTGTACGTGAGAAGCCATCTGTGGAGCTTGTGAAAGTTACTGAAGAGATGAAATCATTCAAGGCCTACAACAAATTACGTCTTGAGCGGACGAATCAGCGTCACCTTGGTGCGAGGTTGAAGAGAGCTGCAGAGGCTGAGAAGGAAGAGAAGAAGTGAGGAGGTTGCTGTTTCAGTTTTTGCGTATGTTAGAGATCTTTTTGTACTCAAATTTTCACTGGACATGGTTGGATGTATTGGTTGACGTTCTTGTAGTGTTTGTTGAGTTTCATGTTTGGAACCATAGAATTATTGGTTTTCCAGTGATAAATAGAAAGATTA 786 0.4326 MVKHNNVIPNAHFRKHWQNYVKTWFNQPARKTRRRLVRQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSVEELKAAGISKKSAPTIGIAIDHRRKNHSLESLQANVQRLKTYKAKLVVFPRRARKVKAGDSAPEELASATQVQGSYMPIVREKPSVELVKVTEEMKSFKAYNKLRLERTNQRHLGARLKRAAEAEKEEKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01716 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bach4g01716 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bach4g01716 207 MobiDBLite consensus disorder prediction 187 207 - -
Bach4g01716 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
Bach4g01716 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Bach4g01716 207 Gene3D - 167 207 - -
Bach4g01716 207 FunFam 60S ribosomal protein L13 166 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01716 Bach-Chr4 14173755 14175251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01716 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 83.246 5.69e-123 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01716 K02873 - rcu:8285160 355.91