Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01689 ATGGCCGTGCATGGAGATAAAATTCCAAAGTCATGCAGCCAAACCCCATATCCTCAAGTGTGCAACCATTACATGGGTGCTACTAATACATTGCCAACTTCCTTAGATACTTCTTCCTCCTCTTCCTTCCATGAATTGGCCCTTAGGGTTACCATGGACCAAGCCATTGAAGCCCACAAGCTTGTCTCAACCATGAAATTGGATAATTTCAATAACAAGTTCGCCAAATTGGCGTGGGAGGATTGTTTGGAGCTCTACGAGGACACAGTTAACAAACTCAACCGTTCAATGAGTTCAAACAATCCAAATGATAGGTTAACATGGCTAAGTGCTTCCATTGCCAACCAACAAACTTGCCAAAATGGTTTCCTTGACTTCAACCTTCCTTCTCACTTGAATTACTTCCCAAACATGTTGAGCAACTTCTCCAAGCTGCTTAGCAATTCATTAGCTATAACCAACGCTTTGGCTTCATCATCAACCTTGGTGAATAGCAAACAAATTGGTGGGAGAAGATTATTGCTCTCGGATGGCTTCCCTGAATGGCTATCAGCTGCAGATAGAAGGCTTCTTCAAGCAACAGAGACAGGTCCCAATGCTGATATAGTGGTAGCACAAGATGGAAGTGGGAATTACAAGACCATTTCAGAGGGTGTGACTGCAGCTTCAAAGCTGGGTGGTGGGCGTGTTGTAGTGTACGTGAAAGCTGGTGTTTACAAGGAAAATGTTGCGGTTACAAAATCAGTTAAAAATCTAATGATTGTGGGAGATGGAATTGATGCAACCATTGTTACCGGTAGCAAGAGTGCACAAGGAACCACAACTTTTCGTTCGGCTACTTTTGGTAAGTTGATTCTTTTCCACAGGAATCCTATACTGCTTGATTAA 888 0.4291 MAVHGDKIPKSCSQTPYPQVCNHYMGATNTLPTSLDTSSSSSFHELALRVTMDQAIEAHKLVSTMKLDNFNNKFAKLAWEDCLELYEDTVNKLNRSMSSNNPNDRLTWLSASIANQQTCQNGFLDFNLPSHLNYFPNMLSNFSKLLSNSLAITNALASSSTLVNSKQIGGRRLLLSDGFPEWLSAADRRLLQATETGPNADIVVAQDGSGNYKTISEGVTAASKLGGGRVVVYVKAGVYKENVAVTKSVKNLMIVGDGIDATIVTGSKSAQGTTTFRSATFGKLILFHRNPILLD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01689 295 Pfam Pectinesterase 201 282 IPR000070 GO:0030599|GO:0042545
Bach4g01689 295 ProSitePatterns Pectinesterase signature 1. 226 245 IPR018040 -
Bach4g01689 295 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 158 IPR035513 -
Bach4g01689 295 PANTHER PECTINESTERASE 8 282 - -
Bach4g01689 295 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 6 156 IPR035513 -
Bach4g01689 295 SMART PMEI_2 3 152 IPR006501 GO:0004857
Bach4g01689 295 CDD PMEI-like_3 11 158 - -
Bach4g01689 295 FunFam Pectinesterase 9 156 - -
Bach4g01689 295 Pfam Plant invertase/pectin methylesterase inhibitor 8 152 IPR006501 GO:0004857
Bach4g01689 295 NCBIfam pectinesterase inhibitor domain 6 156 IPR006501 GO:0004857
Bach4g01689 295 Gene3D - 199 285 IPR012334 -
Bach4g01689 295 SUPERFAMILY Pectin lyase-like 197 281 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01689 Bach-Chr4 13570618 13571505 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01689 11 282 Carbohydrate Esterase AT1G23200 49.498 3.45e-80 251