Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01687 ATGGCTGTGCATGGAGATAAAATTCCAAAGTCATGCAGCCAAACCCCATATCCTCAAGTGTGCAACCATTACATGGGTGCTACTAATACATTGCCAACTTCCTTAGATACTTCTTCCTCCTCTTCCTTCCATGAATTGGCCCTTAGGGTTACCATGGACCAAGCCATTGAAGCCCACAAGCTTGTCTCAACCATGAAATTGGATAATTTCAATAACAAGTTCGCCAAATTGGCGTGGGAGGATTGTTTGGAGCTCTACGAGGACACAGTGAACAAACTCAACCGTTCAATGAGTTCAAACAATCCAAATGATAGGTTAACATGGCTAAGTGCTTCCATTGCCAACCAACAAACTTGCCAAAATGGTTTCCTTGACTTCAACCTTCCTTCTCACTTGAATTACTTCCCAAACATGTTGAGCAACTTCTCCAAGCTGCTTAGCAATTCATTAGCTATAACCAATGCTTTGGCTTCATCATCAACCTTGGTGAATAGCAAACAAATTGGTGGGAGAAGATTATTGCTCTCGGATGGCTTCCCTGAATGGCTATCAGCTGCAGATAGAAGGCTTCTTCAAGCAACAGGGACAGGTCCCAATGCTGATATAGTGGTAGCACAAGATGGAAGTGGGAATTACAAGACCATTTCAGAGGGTGTGACTGCAGCTTCAAAGCTGGGTGGTGGGCGTGTTGTAGTGTACGTGAAAGCTGGTGTTTACAAGGAAAATGTTGCGGTTACAAAATCAGTTAAAAATCTAATGATTGTGGGAGATGGAATTGATGCAACCATTGTTACTGGTGGCAAGAGTGCACAAGGAACCACAACTTTTCGTTCGGCTACTTTTGGGGTTGCTGGTGACGGCTTCATGGCCAAAGACATCACCTTTGAGAACACCGCCGGACCACAGAATCACCAAGCGGTGGCTCTCCGCTCCGGCTCCGACCACTCAGTGTTCTACCGGTGCAGCTTTAAAGGGTACCAAGATACCCTATATGTCTACTCCCAACGCCAATTCTACCGTGACTGTGATATCTACGGCACCGTCGACTTCATCTTCGGCGACGCTGCGGTTGTGTTGCAGAGCTGCAACATCAACGCCAGAAAAAGTGACCAGCGGAACACGATGACAGCTCAAGGGAGAACAGACCCTAATGAGAACACAGGAATTATCATCCATAACTCACGTATAACAGGTTCTGGAGGCACCAATACCTTTCTGGGTCGGCCATGGCAGAAGTATTCAAGGACAGTGGTGATGAAAAGTTCCCTAGATGGGTCAGTTAATCCTGCTGGGTGGTTTCCCTGGAGTGGGAACTTTGCTTTGAGCACTCTCTATTATGGTGAGTATATGAATTCAGGGCCTGGAGCTGACACTTCTGGGAGGGTCAAGTGGCCAGGGTTTCATGTCATTACCAATCCAGCTGAGGCCGGGAAATTCACCGTTGGCAACTTCTTGGCCGGAGGATCGTGGATTTCTGGCACCGGCGTGCCGTTTGACGCCGGCTTGTGA 1509 0.4738 MAVHGDKIPKSCSQTPYPQVCNHYMGATNTLPTSLDTSSSSSFHELALRVTMDQAIEAHKLVSTMKLDNFNNKFAKLAWEDCLELYEDTVNKLNRSMSSNNPNDRLTWLSASIANQQTCQNGFLDFNLPSHLNYFPNMLSNFSKLLSNSLAITNALASSSTLVNSKQIGGRRLLLSDGFPEWLSAADRRLLQATGTGPNADIVVAQDGSGNYKTISEGVTAASKLGGGRVVVYVKAGVYKENVAVTKSVKNLMIVGDGIDATIVTGGKSAQGTTTFRSATFGVAGDGFMAKDITFENTAGPQNHQAVALRSGSDHSVFYRCSFKGYQDTLYVYSQRQFYRDCDIYGTVDFIFGDAAVVLQSCNINARKSDQRNTMTAQGRTDPNENTGIIIHNSRITGSGGTNTFLGRPWQKYSRTVVMKSSLDGSVNPAGWFPWSGNFALSTLYYGEYMNSGPGADTSGRVKWPGFHVITNPAEAGKFTVGNFLAGGSWISGTGVPFDAGL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01687 502 PANTHER PECTINESTERASE 8 492 - -
Bach4g01687 502 FunFam Pectinesterase 196 502 - -
Bach4g01687 502 ProSitePatterns Pectinesterase signature 2. 344 353 IPR033131 -
Bach4g01687 502 FunFam Pectinesterase 9 156 - -
Bach4g01687 502 NCBIfam pectinesterase inhibitor domain 6 156 IPR006501 GO:0004857
Bach4g01687 502 SUPERFAMILY Pectin lyase-like 196 501 IPR011050 -
Bach4g01687 502 ProSitePatterns Pectinesterase signature 1. 226 245 IPR018040 -
Bach4g01687 502 Gene3D - 199 502 IPR012334 -
Bach4g01687 502 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 158 IPR035513 -
Bach4g01687 502 SMART PMEI_2 3 152 IPR006501 GO:0004857
Bach4g01687 502 Pfam Pectinesterase 201 487 IPR000070 GO:0030599|GO:0042545
Bach4g01687 502 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 6 156 IPR035513 -
Bach4g01687 502 CDD PMEI-like_3 11 158 - -
Bach4g01687 502 Pfam Plant invertase/pectin methylesterase inhibitor 8 152 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01687 Bach-Chr4 13543330 13545702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01687 11 502 Carbohydrate Esterase AT1G23200 56.238 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01687 - - gmx:100816802 722.235