LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g01640	ATGGCACCAGCCACCGAGCTCAATGGCTACGGACCAGAGAACCAGATGCAACAGAGGACCCAAGCTCGAGCGTCCATGGCACCAGGCATCGAGCTCAACGACGACGAACCAGAGAACCAGATGCAACAGAGGAGCCGAGGTCACTCACCAATGAGCTTGAGTACGAATCGAGCCTGGGTGACGTTAGAGATGGCACGGGTCATGGCATCCAAGAGCTTCGGGTCTGTGAGATTATTCATACTCATGGAGTCAACAAGTTCCATGTCCCTCAAGCTCTATCTCCTGCTGTTCTTCTTCTTCCTCAACCATGTCTCCGTTTCCTCCCTCTCTGTCTCAAACTCGACCCCAATATTCCCAAAACAAGCCTTGCCCACCAAATCTGGATACCTCCCTGTCAACCCCTCTTCAAAATCTGCCATTTACTTTGCATTTTACGAAGCCCAGACCCCAAAATCCCCTCTTTCAAAAACCCCACTGGTCGTTTGGCTCCAAGGTGGCCCTGGCTGCTCATCCATGATTGGCAACTTCTTCGAGCTCGGTCCCTGGCGTGTCACTTCCGATTCCCTCACGCTCGAGCCAAACCCAGGTGCTTGGAACAGAATATTTGGCCTTCTTTTCCTTGATAACCCGATTGGAACTGGCTTCAGCATAGCTTCTAAGCCTGAAGAGATCCCAAGAGATCAAATGTCTGTAGCAAAACACCTCTTTGCTGCTATAACCAAGTTCATCGAGCTAGGCCCAGTTTTCAAAGATCGTCCAATTTACATCACTGGCGAAAGCTATGCTGGGAAGTACGTCCCAGCAATTGGGTATTACATTTTGAAGTCAAATGAGAAATTGCCAGTTTCCCGAAGGTTGAATTTGGCTGGTGTGGCAATCGGAGATGGGTTAACAGACCCGGTAACCCAAGTGGCAACTCATGCTGTGAATGCCTATTATGTTGGGTTAATCAATGAAAGACAGAAGATTGAACTAGAGAAGCTTCAATTAGAGGCAGTTAGACTGACCCAGAAGGAGAATTGGAGTGAAGCAAGGGAGGCCAGGAACAGGGTGTTGGGAACATTGGGGAACATGACTGGGCTAGCTACTTTGTTTGATTACACAAAGAAAGCTCCATACAGAGATTATTTGGTAGATGAATTGTTGAAATTTGGTGAAATAAAGAAGCTTTTGGGGGTTAGTGAGTCTCTTGTGTTTGAGTCTTGTAGTGATGTAGTGGGTGAAATATTGGGAGATGATGTGATGAAGAGTGTCAAGTTTATGGCTGAGTACTTGGTTAAGAATAGCAAGGTATTGTTGTATCAAGGGCAGTATGATTTGAGGGATGGAGTGCTGCAAGTTGAGGCTTGGGTGAAGACAATGAAATGGGAAGAGATTGGGGAATTTCTGAATGCAGATAGGAAGATTTGGAACGTGAATGGAGAGCTTGCTGGGTATGTGCAGAAATGGAAGAGTCTCACTAATGTTGTGGTTTTGGGTGCTGGCCATCTCTTGCCTGCTGATCAGTCTGTGAATTCTCAAGCTATGATAGAAGATTGGATTTTGGCAAGGGGTTTGTTTGGCAATGAGCAATATGAAAGTGAGCCATCAAGTGTCCGGCATAAGCTGATGTGA	1614	0.4678	MAPATELNGYGPENQMQQRTQARASMAPGIELNDDEPENQMQQRSRGHSPMSLSTNRAWVTLEMARVMASKSFGSVRLFILMESTSSMSLKLYLLLFFFFLNHVSVSSLSVSNSTPIFPKQALPTKSGYLPVNPSSKSAIYFAFYEAQTPKSPLSKTPLVVWLQGGPGCSSMIGNFFELGPWRVTSDSLTLEPNPGAWNRIFGLLFLDNPIGTGFSIASKPEEIPRDQMSVAKHLFAAITKFIELGPVFKDRPIYITGESYAGKYVPAIGYYILKSNEKLPVSRRLNLAGVAIGDGLTDPVTQVATHAVNAYYVGLINERQKIELEKLQLEAVRLTQKENWSEAREARNRVLGTLGNMTGLATLFDYTKKAPYRDYLVDELLKFGEIKKLLGVSESLVFESCSDVVGEILGDDVMKSVKFMAEYLVKNSKVLLYQGQYDLRDGVLQVEAWVKTMKWEEIGEFLNADRKIWNVNGELAGYVQKWKSLTNVVVLGAGHLLPADQSVNSQAMIEDWILARGLFGNEQYESEPSSVRHKLM	537

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g01640	537	Coils	Coil	318	338	-	-
	Bach4g01640	537	MobiDBLite	consensus disorder prediction	1	52	-	-
	Bach4g01640	537	ProSitePatterns	Serine carboxypeptidases, serine active site.	256	263	IPR018202	GO:0004185
	Bach4g01640	537	Gene3D	alpha/beta hydrolase	105	521	IPR029058	-
	Bach4g01640	537	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	119	502	IPR001563	GO:0004185\|GO:0006508
	Bach4g01640	537	FunFam	Carboxypeptidase	109	521	-	-
	Bach4g01640	537	Pfam	Serine carboxypeptidase	123	514	IPR001563	GO:0004185\|GO:0006508
	Bach4g01640	537	MobiDBLite	consensus disorder prediction	10	24	-	-
	Bach4g01640	537	SUPERFAMILY	alpha/beta-Hydrolases	122	514	IPR029058	-
	Bach4g01640	537	PRINTS	Carboxypeptidase C serine protease (S10) family signature	486	499	IPR001563	GO:0004185\|GO:0006508
	Bach4g01640	537	PRINTS	Carboxypeptidase C serine protease (S10) family signature	194	206	IPR001563	GO:0004185\|GO:0006508
	Bach4g01640	537	PRINTS	Carboxypeptidase C serine protease (S10) family signature	207	217	IPR001563	GO:0004185\|GO:0006508
	Bach4g01640	537	PRINTS	Carboxypeptidase C serine protease (S10) family signature	242	267	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g01640	Bach-Chr4	12732216	12734549	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach4g01640	412	519	Calmodulin-binding Proteins	AT2G22960	25.000	4.91e-07	48.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g01640	K09645		-	qsa:O6P43_032607	641.728