Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01621 CTTGCTCTTGCCATTATATATCTTCCATTGTTCCTAGCTACCTGGGTTATATCTACCATTTTGAAGAACAAATTAAAGAACGTGGAGCATATATAAAGTTTGCAATGAGGAAGCCTTGCTGTGATAAGCAAGACATGAACAAAGGTGCCTGGTCCAAACAAGAAGACCAGAAGCTCATAGATTACATCCAGAAACATGGCGAGGGTTGCTGGCGTACTCTCCCTCAAGCTGCAGGCCTACTTCGCTGCGGTAAAAGTTGCAGGCTAAGATGGATAAACTATCTACGGCCTGATGTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCGCTGCTAGGCAACCGGTGGTCACTAATAGCTGGAAGATTGCCGGGAAGGACAGATAATGAAGTGAAGAACTATTGGAACTCTCATCTCAGAAGAAAGCTTATTAAAATGGGTATTGATCCAAATAATCATCGCATAGGTTATAAAACCCCACCCCTTCAAAATGCAGCAACATTAGATAGTTCAGCATCATCTGGGTCAAAAGAAAATGCCAAGAATATTGAGCCAACAAAACCCCATGATGGTGGTGGCACCAACTGTGATCTTGTATCAGATGCTGCAAGTGGCTTGGAAGATGAATCATATAGCGTGCCAGATTTGAACCTTGATCTCAATATGAGCATGATTTCTCCTTCCCCTTGTAGTCCTCAAGAAAAAGAAGAATCCAAAACATCAAGAGATCCTCATTTTTTCTCCTCTCGAACACTTCGTCTGTTTCAGTGATCAGTTTTATTGATTCGCTTTATG 815 0.4172 MRKPCCDKQDMNKGAWSKQEDQKLIDYIQKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDVKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLIKMGIDPNNHRIGYKTPPLQNAATLDSSASSGSKENAKNIEPTKPHDGGGTNCDLVSDAASGLEDESYSVPDLNLDLNMSMISPSPCSPQEKEESKTSRDPHFFSSRTLRLFQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01621 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bach4g01621 228 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach4g01621 228 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bach4g01621 228 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bach4g01621 228 CDD SANT 68 111 IPR001005 -
Bach4g01621 228 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bach4g01621 228 CDD SANT 15 60 IPR001005 -
Bach4g01621 228 Gene3D - 13 65 - -
Bach4g01621 228 MobiDBLite consensus disorder prediction 189 206 - -
Bach4g01621 228 MobiDBLite consensus disorder prediction 135 153 - -
Bach4g01621 228 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 173 - -
Bach4g01621 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bach4g01621 228 MobiDBLite consensus disorder prediction 189 228 - -
Bach4g01621 228 Gene3D - 68 132 - -
Bach4g01621 228 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bach4g01621 228 SMART sant 65 113 IPR001005 -
Bach4g01621 228 SMART sant 12 62 IPR001005 -
Bach4g01621 228 MobiDBLite consensus disorder prediction 125 172 - -
Bach4g01621 228 FunFam MYB transcription factor 67 127 - -
Bach4g01621 228 FunFam MYB-related transcription factor 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01621 Bach-Chr4 12440683 12441903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01621 2 200 MYB Transcription Factor Family AT4G09460 54.808 8.07e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach4g01621 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01621 K09422 - ming:122083541 319.701