Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01604 ATGGGGGATCACTTTGTATTGCTGGTTGATCGATTGCTTACTGAATCCACTTTAGAAGCTGCACTTGAAAGCAGAAATCGTTCGATGCAGGCAGCATCTTCAGCCGTGAAGGACACAGAAGTTGATATCTCTTTGATGAATATGGGTCTGGGAGATATGAAATCTGGTAAACTGGTGGAATGTAGGATATGCCAGGATGAGGATGAGGATTCCAATATGGAAACTCCCTGCTCTTGCTGTGGTAGTTTGAAGTATGCTCACCGAAGATGTGTACAACGGTGGTGTAATGAAAAGGGTGACACCATATGTGAGATATGCCAACAGCCATTCAAGCCTGGTTATACAGCTCCTCCTCCTCTATTTCAATTTGGACGTATTCCAATGAGTTTCAGGGGGAACTGGGAGATTTCAAGAAGAGACTTGAATAGTGCTCATTTGGTTAGCATGGTTTCCAGTGATCAGAACCTTATCAGTTCTAACTATGATCAATACTCAGCTTCTACAACAGGAAGTTTGATATGCTGTCGTTCAATTGCAGTCATTGTCATGGTATTGCTGATTTTGAGACATTCTCTTCCCCTAATATTTAGTACCAACCCGGAGTATTCCTTATCAATCTTCATGTTGTTACTTTTTCGAACTGCTGGTATTGTTGTGCCTGTGTACTTTATGTTGAGAGCAGTGACATCCATCCAGAGGCATCGGAGACAACAAAGGGAGCCTCCTAATACTGCGATAAATTCATCTGATGATGAAAATGGATCATCATCAGACTTGCTGCCTCAACCCCATATTGTTCGTGTACAGTAAAAATGCTCTAGATACAGCATCTAGCATGAAATGCTGCTATTCTTTTCAGATACAGCAAGTGCTTTTCTGCTTTATTTATGCAAAATAGAAGAGCATTAGTTTAAGAACATTTAATTGCAGGAGAGTAAAACACTGGAATTTGGTGTGTGCATAAGGTATCATAATTTTTGCACCGTATGCAATGCCACTTCTGTTGTCAAGTTTGTGAAGATACTCTCCTCAGCAAGTCCAAGTGGCTGGAACAGCAAGCTACAGATTACTGTTGCAGTTTATATTTAGAGCTATGCAGATTCTGAACAATACCTCCACTGTACATAGACACATTTATAATTGATAAGATGCAGGTATAGATATCAAAGTTGAAAGAATGGACGTGTACATATTTACTATGAAGAATGTGTATTTACATTTGTGACTTTTCCTTCATTTTGGCATGCTAGCTTC 1254 0.3987 MGDHFVLLVDRLLTESTLEAALESRNRSMQAASSAVKDTEVDISLMNMGLGDMKSGKLVECRICQDEDEDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICQQPFKPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVSSDQNLISSNYDQYSASTTGSLICCRSIAVIVMVLLILRHSLPLIFSTNPEYSLSIFMLLLFRTAGIVVPVYFMLRAVTSIQRHRRQQREPPNTAINSSDDENGSSSDLLPQPHIVRVQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01604 269 FunFam Zinc finger family protein 51 116 - -
Bach4g01604 269 Pfam RING-variant domain 61 106 IPR011016 GO:0008270
Bach4g01604 269 Pfam Protein of unknown function (DUF3675) 112 228 IPR022143 -
Bach4g01604 269 MobiDBLite consensus disorder prediction 234 269 - -
Bach4g01604 269 ProSiteProfiles Zinc finger RING-CH-type profile. 53 113 IPR011016 GO:0008270
Bach4g01604 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 116 IPR013083 -
Bach4g01604 269 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 238 IPR033275 -
Bach4g01604 269 MobiDBLite consensus disorder prediction 241 262 - -
Bach4g01604 269 CDD RING_CH-C4HC3_MARCH 61 107 - -
Bach4g01604 269 SUPERFAMILY RING/U-box 59 111 - -
Bach4g01604 269 SMART ringv_2 60 107 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01604 Bach-Chr4 12267185 12269783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01604 60 107 C3H Transcription Factor Family AT2G37950 47.059 5.81e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01604 - - gmx:100794088 414.461