Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01542 TAAATTGTTCCCTCTTTATCTTCTCCTGTGAAGCCTCTCATGCTTTTGTGGTCGCTCTTCTGTCCTCTCAGAGAAAGTTGGCGAGAAAGCACAGAGAGAACCGACGAGGAAAAAGAACAGTATTCACAGATTCGAGAAAAATATCCAGGGTTTTGGAAATCTGAGTCTGCAATCACATTCCTCCTCTAGTCCCTCATAAAATGGCGATGCCGTTTTCGGACGGAGCTGGAGGTGTAGCTGTAATGTCTGGCCCTGTGAGCACAGTTGATTCTTCACCTTCAAAGAATTGCTTGAAGAACTCACTACTGAAATCGCCGATAATGATATTCTCTTTCTTCCACAAAGCTATTCGTTCTGAGCTCGAGAGCCTCCATCGAGTCGCCTTGGATTTTGCCACTAGCCAAGAAGCTGCTGACTCTGACATCAAACCCTTGTTCGACCGGTGCCATTTTCTTCGTGCTATTTATAAGCACCATTGCAATGCTGAGGATGAGGTTATATTTCCTGCCTTAGATAAACGTGTGAAGAATGTTGCACGCACATATTTCTTGGAACATGAGGGAGAAGGACTTCTTTTTGATCAGTTGTTCAAACTGTTAAATTCCAATTGTCTAAATGAAGAGGGATATCGAAGAGAATTGGCTTCTTGTACTGGAGCCCTTAGAACATCAATTAGCCAGCATATGTTTAAGGAAGAGGAACAGGTATTCCCCTTGGTTATTGAGAAGTTTTCATTTGAAGAGCAGGCGTCATTGGTATGGCAATTTCTGTGCAGCATACCAGTTAAAATGATAGCAGAATTTCTTCCCTGGCTTGCTTCATATGTATCGTCGGAGGAACATCAGGATATGCTTAGGTGCTTGTGCAAGATAATACCTGAAGAGAAACTTCTTCAGCACGTTGTTTTTGGATGGCTGGAAGGAGCAAAGATTAAACATAGAAACTGCACACACGATACTAAGGTTCAATGTCAGGATGCTGGGACAGGCAACATAACCGGCCTCATTGAAAAGGTTTACTGCACATGTGAACCTTCCAATACAGGAAAAAGGAGACGGATGGAGCTATGCAGCAACCATACTGGCTCCACTGTATCATGCCCTATAGATGAAATATTACTTTGGCATAAAGCTATAAAGAAAGAGTTGAGTGATTTAGCTGAGGCAGCTAGGAAGATACATCTTTCTGGAGAATTCCCTGTTTTGTCTGCTTTCAATGTGAAGCTGAAATTTATTACCGAAGTCTGCATCTTTCATAGCATTGCTGAGGACAAAGTTATTTTCCCTGCTATAGATGAAGAGCTCTCTTTCGTCCAGGAGCATGCAGATGAAGAACTTCAATTTGAAAAGCTTAGGTGTCTGATAGAAGGTATCCAAAGTGCTGGAGCCAACTCATCATGTGCTGGATTTTATTTGTTGTGTTCTCATGCTGATCAAATAACGGACACCATACTGAAGCACTTTGAGACTGAAGAAGCTCAGGTTCTTCCACTTGCACGAAAGCTTTTTAGCCCCCAAAGACAACGAGAAATACTTTATGAAAGCTTGTGCTTAATGCCCTTGAAACTAATTGAGTCTGTATTACCATGGCTGATAGGATCATTTAGTGAAGAAGAAACAAGATCATTTCTTCAGAATATGTACTTGGCAGCCCCAGCAACAGATTATGCATTGGTTACCCTTTTCTCTGGTTGGGCATGCAAAAGATATTCTGGCAACGGTTGTTTCTCTTTAAGTGTGACAGGTTCATGTCCTGCCACAAGATTTGTGGGAAACGAAAGCACTTGCCCATCATTCTGCAATTGTGAACCTCCAATCAGTCCCAAGGAAAAATCTTTATCCACTCAACATGATGGTGCTGATGGCAGTAGTGGACCAGTTAAGCATGGAAACCCAGAAGCAAACAGAGAGAATGATGTTTATTGCCTCACAGGAATTAAAGGATTTCCTAACTCACCTTGTGATCGATCTTGCTCTGCCCCTGGATTAGGGGTTAGGGCAAGCCATCTGGGAGTGGGTTCTATAGCCATAACAAAGTCTCTGCGGTCCTTATCTGACTGTCCTTCTGCACCTTCCCTGAACTCCAGTCTTTTTGCTTGGGAAACAGATACTGCCTTTGCTGAAAATGGATTTACAGCACGACCCATTGATAACATATTTAAATTTCATAAAGCCATTTGTAAAGACTTGGAACATTTAGACGTTGAATCTTGCAAACTTAATGATTGTGATGAAGTTTTCCTTAGGCAATTCACTGGTAGGTTTTTCTTGCTTTGGGGTCTGTATCGAGCTCATAGCAATGCAGAGGATGATATAGTATTTCCAGCATTGGAATCAAAAGAGACTCTCCATAATGTGAGCCACTCTTATACTCTGGATCACAAGCAAGAAGAGAAGTTATTTGAAGATATTTTTTCTGGACTCTCTGAGCTTACTCAGTTATGTGAATTCCTGCATAGTTCATCAGACAATTTAACCAGCTCCGATTCTGATCATTCTGATTGTTCTGAAACAATGCAAAAGTACATTGAGCTTGCTACAAAGATTCAGGGCATTTGTAAATCTATTAGAGTGACACTGGACCAACATATTTTCAGGGAGGAGCTTGAATTATGGCCATTGTTTGATAGACATTTCTCTGTGGAAGAACAGGATAAAATTCTTGGTCGCATAATTGGTACTACAGGGGCAGAGGTTCTCCAATCAATGCTTCCATGGGTAACTTCTGCACTTACTCTAGAGGAGCAAAACAAAATGATGGACACATGGAAGCAGGCCACCAAGAACACTATGTTCAGTGAGTGGCTTGATGAGTGGTGGGAAGGACCTGCTTCATCTTCAAATACATCTACAACTAGAGATTGTATTGCGCTAGGTACTGATCCCTCTGAAAGCTCAGACCATAGCTTGCAAGCTTTCAGGCCTGGATGGAAAGATATATTCAGGATGAACCAAAATGAACTTGAATCAGAAATAAGAAAAGTTTCTCGAGATTCAACTCTTGATCCCAGAAGAAAAGCATATCTCATTCAAAATCTAATGACCAGTCGCTGGATAGCTTCTCAGCAGAAGTCATCTCAAGCAACAGCAGGTGATTATGCAAATGGGGAAGGTTTACTTGAATGTGCACCTTCATTTTATGATCCAGAGAAAAAAGTCTTTGGTTGTGAGCATTACAGAAGAAATTGTAAACTACGTGCTGCTTGTTGTGGCAAGCTATTCACATGTAGGTTCTGCCATGATAAAGTCAGTGACCATTCAATGGATAGGAAGGCTACAAGTGAGATGATGTGCATGCGCTGCCTGCAAATACAGCCAGTTGGACGTTGTTGTGTAACACCTTCTTGTGGTGGTTTCTCAATGGCAAAGTACTATTGTAATATCTGCAAATTTTTTGATGATGAAAGGGCAGTTTATCATTGCCCTTTCTGCAATTTATGCCGTCTAGGGAAGGGACTGGGTGAAGACTTCTTTCATTGCATGCAATGTAATTGTTGCCTTTCAACAAAATTAGTTGATCACGAGTGCAGGGAAAAGGGTCTAGAAACAGACTGCCCTATATGCTGTGATTTTTTATTCACATCTAGTGCATCTGTAAGAGCTCTTCCCTGTGGCCATTTCATGCATTCTGCTTGTTTTCAGGCATATACATGTAGTCACTACATCTGTCCAATTTGCAGCAAATCTTTGGGAGATATGGCGGTTTACTTTGGCATGCTTGATGCTCTGTTGGCTTCTGAGCAACTTCCAGAAGAATATCGGAGTCACTTTCAGAATATACTTTGTAATGACTGCGGGAAGAAGGGGACTGCACGATTCCATTGGCTATACCATAAATGTGGGTTTTGTGGATCTTACAATACAAGAGTCATTTAAGTCGACTCAAGTTTCAACTGCTCCACATGAAACATATCTGCCTCGAGGTGACTTTCTGTAAGTACAAGGCATGAAAGAAAAGAATGCTCGTACAGTATTGGTTGAATTTTCCAATGCTTTCAGTATGATACCCAGAAAGGGATTTAGAATACTTGTGAGATCAAGAACAAATGCCAAATGCCATCAATCATTGGTGTTTTGGATGGTGCTGACTATTTTTGTCAAATGCAATGTTTGGAGTTTGGAGTGTAACGGTTCATAAAGGAAGTAAAGGGAAGGGAATA 4159 0.4133 MAMPFSDGAGGVAVMSGPVSTVDSSPSKNCLKNSLLKSPIMIFSFFHKAIRSELESLHRVALDFATSQEAADSDIKPLFDRCHFLRAIYKHHCNAEDEVIFPALDKRVKNVARTYFLEHEGEGLLFDQLFKLLNSNCLNEEGYRRELASCTGALRTSISQHMFKEEEQVFPLVIEKFSFEEQASLVWQFLCSIPVKMIAEFLPWLASYVSSEEHQDMLRCLCKIIPEEKLLQHVVFGWLEGAKIKHRNCTHDTKVQCQDAGTGNITGLIEKVYCTCEPSNTGKRRRMELCSNHTGSTVSCPIDEILLWHKAIKKELSDLAEAARKIHLSGEFPVLSAFNVKLKFITEVCIFHSIAEDKVIFPAIDEELSFVQEHADEELQFEKLRCLIEGIQSAGANSSCAGFYLLCSHADQITDTILKHFETEEAQVLPLARKLFSPQRQREILYESLCLMPLKLIESVLPWLIGSFSEEETRSFLQNMYLAAPATDYALVTLFSGWACKRYSGNGCFSLSVTGSCPATRFVGNESTCPSFCNCEPPISPKEKSLSTQHDGADGSSGPVKHGNPEANRENDVYCLTGIKGFPNSPCDRSCSAPGLGVRASHLGVGSIAITKSLRSLSDCPSAPSLNSSLFAWETDTAFAENGFTARPIDNIFKFHKAICKDLEHLDVESCKLNDCDEVFLRQFTGRFFLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDIFSGLSELTQLCEFLHSSSDNLTSSDSDHSDCSETMQKYIELATKIQGICKSIRVTLDQHIFREELELWPLFDRHFSVEEQDKILGRIIGTTGAEVLQSMLPWVTSALTLEEQNKMMDTWKQATKNTMFSEWLDEWWEGPASSSNTSTTRDCIALGTDPSESSDHSLQAFRPGWKDIFRMNQNELESEIRKVSRDSTLDPRRKAYLIQNLMTSRWIASQQKSSQATAGDYANGEGLLECAPSFYDPEKKVFGCEHYRRNCKLRAACCGKLFTCRFCHDKVSDHSMDRKATSEMMCMRCLQIQPVGRCCVTPSCGGFSMAKYYCNICKFFDDERAVYHCPFCNLCRLGKGLGEDFFHCMQCNCCLSTKLVDHECREKGLETDCPICCDFLFTSSASVRALPCGHFMHSACFQAYTCSHYICPICSKSLGDMAVYFGMLDALLASEQLPEEYRSHFQNILCNDCGKKGTARFHWLYHKCGFCGSYNTRVI 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01542 1224 Gene3D - 1189 1224 - -
Bach4g01542 1224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1113 1162 IPR013083 -
Bach4g01542 1224 CDD Hr-like 652 806 - -
Bach4g01542 1224 Gene3D nmb1532 protein domain like 303 448 - -
Bach4g01542 1224 Gene3D nmb1532 protein domain like 37 191 - -
Bach4g01542 1224 MobiDBLite consensus disorder prediction 543 566 - -
Bach4g01542 1224 SUPERFAMILY CHY zinc finger-like 983 1045 IPR037274 GO:0008270
Bach4g01542 1224 SMART ring_2 1118 1159 IPR001841 -
Bach4g01542 1224 FunFam Zinc finger protein-related isoform 1 1113 1162 - -
Bach4g01542 1224 CDD Hr-like 303 430 - -
Bach4g01542 1224 CDD RING-H2_Pirh2-like 1117 1160 - -
Bach4g01542 1224 Pfam Hemerythrin HHE cation binding domain 46 173 IPR012312 -
Bach4g01542 1224 Pfam Hemerythrin HHE cation binding domain 301 432 IPR012312 -
Bach4g01542 1224 CDD Hr-like 42 171 - -
Bach4g01542 1224 ProSiteProfiles Zinc finger RING-type profile. 1118 1160 IPR001841 -
Bach4g01542 1224 ProSiteProfiles Zinc finger CTCHY-type profile. 1054 1117 IPR017921 -
Bach4g01542 1224 Pfam CHY zinc finger 989 1064 IPR008913 GO:0008270
Bach4g01542 1224 Gene3D nmb1532 protein domain like 645 864 - -
Bach4g01542 1224 Pfam Zinc-ribbon 1165 1222 IPR039512 -
Bach4g01542 1224 SUPERFAMILY RING/U-box 1117 1163 - -
Bach4g01542 1224 SUPERFAMILY Zinc hairpin stack 1055 1110 IPR037275 -
Bach4g01542 1224 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 691 1224 - -
Bach4g01542 1224 ProSiteProfiles Zinc finger CHY-type profile. 982 1051 IPR008913 GO:0008270
Bach4g01542 1224 Pfam Ring finger domain 1117 1159 IPR001841 -
Bach4g01542 1224 FunFam Zinc finger protein BRUTUS 643 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01542 Bach-Chr4 11455630 11463838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01542 1 1224 C2H2 Transcription Factor Family AT3G18290 60.383 0.0 1475