Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01534 ATGTCCAACTGTACACAAAAACACTGTCACTACGTACTGTTACTGACATTGAAATTATTGACCTCCTCCATTGCCGCCGAACCCCGCAAGAGTACAGCAGCTATGTCAAGTGCTGTGAAGAGGGAGTGTGGTCCTAATGAAGAAGAGTGTGAGCTCAGAAGAGGGCCATGGACCCTAGAAGAAGACAGCTTACTCATACACTATATTACCAGGCACGGCGAGGGTCGGTGGAATATGTTAGCCAAAAGTGCAGGACTGAAGAGAACAGGGAAGAGTTGCAGACTGAGGTGGCTGAATTACCTGAAACCTGATATTAAAAGAGGGAATCTTACCCCACATGAGCAGCTTTTGATTCTTGAACTCCATGCCAAGTGGGGTAACAGGTGGTCAAAAATTGCCCAGCATCTACCTGGAAGAACAGACAATGAGATCAAGAACTACTGGAGAACAAGGGTGCAGAAACAGGCACGCCAACTTAACATTGAATCAGGTAGCAAGAAGTTCTTTGATGCTGTACGATGTTTTTGGATGCCAAGATTGCTGCAGAAGATGGAACAGAGTTCTTCCTCCTCCCCTTACTGCTCTGTGCCCAACATGAATTTGGGGAATTCAGCAGAAAATTCAATGCCAAACACTAGACTTCCTTCTCTGTCTCCATCCCCTCCTCCGCAAATGGAATTCATTGATGCCGCAGATCATCCAAGCTCTACGTCTAGCAGCCTCAGCAATTTTTCTTCTGAGTGTTCAACGAAATTCTCTCAGATGCCTGAAATTTCAGAACAACCAACTAGTCCTTTCCAATTGTTTGAGCACAATGTTCATCACAACAATCAAATCCAAGATAGTTGGTACATGAACACCAATGGTTATGGCACGGAAGGCATAAACTTGGACACACTCTCTATAATGGAAAGCTGTGACATTCCACAGCTAGATTGTCACACTGGGGAGAGTGATTGGATGTTTGGCATGGGTGAAACTTTATGGAACATGGATGCAATGTGA 1005 0.4488 MSNCTQKHCHYVLLLTLKLLTSSIAAEPRKSTAAMSSAVKRECGPNEEECELRRGPWTLEEDSLLIHYITRHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPHEQLLILELHAKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKKFFDAVRCFWMPRLLQKMEQSSSSSPYCSVPNMNLGNSAENSMPNTRLPSLSPSPPPQMEFIDAADHPSSTSSSLSNFSSECSTKFSQMPEISEQPTSPFQLFEHNVHHNNQIQDSWYMNTNGYGTEGINLDTLSIMESCDIPQLDCHTGESDWMFGMGETLWNMDAM 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01534 334 CDD SANT 111 150 IPR001005 -
Bach4g01534 334 ProSiteProfiles Myb-like domain profile. 102 152 IPR001005 -
Bach4g01534 334 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 49 253 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach4g01534 334 SUPERFAMILY Homeodomain-like 52 148 IPR009057 -
Bach4g01534 334 CDD SANT 56 101 IPR001005 -
Bach4g01534 334 ProSiteProfiles Myb-like domain profile. 49 101 IPR001005 -
Bach4g01534 334 Pfam Myb-like DNA-binding domain 107 150 IPR001005 -
Bach4g01534 334 Pfam Myb-like DNA-binding domain 54 101 IPR001005 -
Bach4g01534 334 MobiDBLite consensus disorder prediction 204 227 - -
Bach4g01534 334 FunFam Myb transcription factor 54 106 - -
Bach4g01534 334 Gene3D - 110 155 - -
Bach4g01534 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 101 IPR017930 -
Bach4g01534 334 Gene3D - 54 106 - -
Bach4g01534 334 FunFam MYB transcription factor 110 152 - -
Bach4g01534 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 156 IPR017930 -
Bach4g01534 334 SMART sant 53 103 IPR001005 -
Bach4g01534 334 SMART sant 106 154 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01534 Bach-Chr4 11364110 11366782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01534 51 246 MYB Transcription Factor Family AT1G68320 67.857 8.75e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach4g01534 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01534 K09422 - gmx:100780759 396.356