Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01533 ATGCCTCTCCCCACAGATGCCCTTTTGGATCAACACTCTAATCTTCCTATTTTTGACCTCTTTAATCATTCTGAGGAGAACCCAAATCCTATCCCAATGTTTCAGTCATCAGCGTCTGCCTATGGTGCTGGATTTGATGATGAACAAGCAAAGATGGTGTCTCTTTCAGAGAGTTTAGGCAATTCTTCTACTTCTTCTCCAGTATCTGGGACTGCTTTCGCTGAAATGAACAAGACTGTGGGAGGAAACAAAAGGAAGAGAAACAATGGCAGACGTGAAGATAAATCAAAAGATGTGATCCATGTAAGGGCAAAGAGAGGCCAAGCTACTGATAGCCACAGTTTAGCAGAGAGGGTAAGAAGAGAGAAAATCAATGAGAAGCTGAAATGCTTGCAGGAGTTGGTTCCAGGGTGCTACAAGGCAATGGGAATGGCAGTAATGTTAGATGTGATAATAAACTATGTTCAATCACTGCAGCAACAGATTGAGTTCCTCTCCCTGAAGCTTTCAGCAGCAAGTATGTACTTTGATATCAACACTTCAGAGATGCATGCATCTGAAACTATGCAGGGTACAAGCACTAATGCAATCCAAGACATTGAAAAAGTGGCAGGAGAAGGTTATTATGGAGGAGGACTCTCTTCTTATTTCAACCCAACATGGCCACTTTATTAA 675 0.4207 MPLPTDALLDQHSNLPIFDLFNHSEENPNPIPMFQSSASAYGAGFDDEQAKMVSLSESLGNSSTSSPVSGTAFAEMNKTVGGNKRKRNNGRREDKSKDVIHVRAKRGQATDSHSLAERVRREKINEKLKCLQELVPGCYKAMGMAVMLDVIINYVQSLQQQIEFLSLKLSAASMYFDINTSEMHASETMQGTSTNAIQDIEKVAGEGYYGGGLSSYFNPTWPLY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01533 224 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 58 190 IPR024097 GO:0006355
Bach4g01533 224 CDD bHLH_AtBPE_like 98 179 - -
Bach4g01533 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 175 IPR036638 GO:0046983
Bach4g01533 224 Gene3D - 103 166 IPR036638 GO:0046983
Bach4g01533 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 158 IPR011598 GO:0046983
Bach4g01533 224 MobiDBLite consensus disorder prediction 58 73 - -
Bach4g01533 224 SMART finulus 114 164 IPR011598 GO:0046983
Bach4g01533 224 Pfam Helix-loop-helix DNA-binding domain 112 141 IPR011598 GO:0046983
Bach4g01533 224 MobiDBLite consensus disorder prediction 80 99 - -
Bach4g01533 224 MobiDBLite consensus disorder prediction 58 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01533 Bach-Chr4 11349911 11351392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01533 89 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 61.481 3.25e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g01533 HLH 2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01533 - - aprc:113869931 232.261