Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01514 ATGACTTCTATTAAGAACGTGGCAAACGCCGTCGGTGGCAAAACCGCAAGAGCCTGTGATGGCTGCATAAAGAAGCGGGCACGCTGGTATTGTGCTGCCGACGATGCTTTTCTTTGTCAAACTTGTGACTCTTCGGTTCACTCCGCGAATCCCTTGGCTCGTAGGCATGAAAGAGTTCGCTTGAAAACGGCGTCGTGCAAGTCGTCGGATGTTGCCAATTCTCTGCCGTCCTGGCACCGTGGGTTCACCAAGAAGGCTCGAACACCACGGCATGGGAAACACCACTCAGCCAATCATCAAACAACTAAAGTACGAAATGAGCTCGTCCTGAGGAACCCCTTTCATCTGGTGCCGGAAGTGGGTTCAGAAGAATCGAATTCGTATGATGAGAATGAAGCACAGTTGCTTTATCGGGTACCCATTTTTGATCCCTTCGTGGCCGAGCTGTGCACTCCTCCTTCGTCAGTGACTTCAGCTGAAGCAGCAGCAGCAGCTATGGCGAGTCCTAACGAGGTGGAGAACAAGCCTAACAAAAGCATCGAAAGCAAAGTTTCTTCGGGTAATAACAATGAAGGGATTGAAAACTTACATGGGTTTCTTCCATCTGATATGGAACTTGCTGAATTTGCAGCTGATGTTGAGAGCTTATTGGGTAGGGGGCTAGAAAATGAGTGTATTGGCATGGAAGAGTTGGGTCTGATTGATTGTAAAGCAGAGGACTCAAGGGAGTGTTCTGTGGGTAGTGGGAAGGTGAAGATGGAAGAAGAAGAGGACATGGGAACGGCAGCTGCTGCTACTACAGCAGCTTGCAAGCCTGAGATGGGGAGAGAGCCAGTTGAATTGAATTTCAATTATGACTCTGCTGAAGCAGCGGAAGAAGTGGAGGAGAAGCTTGGTTTCGATATGAACAAAGATGTCAAGAATGGTGGGGAAATCAATGAGATTAAGCAGGTGAAGAAGAAGATATTATTGAGGCTTGATTATGAGGCTGTAATCACTGCCTGGGCAAGCCAAAAGTGCCCCTGGACCAACGGGAATAAACCAGATTTTGACCCTGATGAGTGCTGGCCTGATTGCTTGGGTTCTTGTGGAATGGAGCTTCATCATCCATATGGTGAATTGGGTGGATATGGGATTCACCCAGGCGGGGGAAGAGAGGCGAGGGTGTCAAGGTACAGAGAGAAGCGCCGGACGAGGTTGTTTTCTAAGAAAATAAGGTACGAAGTTCGGAAATTGAATGCAGAGAAAAGACCAAGAATGAAAGGGAGGTTTGTGAAGAGGGCTTCTTTTGCGGCAGCACAGCCTAGTTTCCCTCTGCTAAGCAAATGA 1329 0.4831 MTSIKNVANAVGGKTARACDGCIKKRARWYCAADDAFLCQTCDSSVHSANPLARRHERVRLKTASCKSSDVANSLPSWHRGFTKKARTPRHGKHHSANHQTTKVRNELVLRNPFHLVPEVGSEESNSYDENEAQLLYRVPIFDPFVAELCTPPSSVTSAEAAAAAMASPNEVENKPNKSIESKVSSGNNNEGIENLHGFLPSDMELAEFAADVESLLGRGLENECIGMEELGLIDCKAEDSRECSVGSGKVKMEEEEDMGTAAAATTAACKPEMGREPVELNFNYDSAEAAEEVEEKLGFDMNKDVKNGGEINEIKQVKKKILLRLDYEAVITAWASQKCPWTNGNKPDFDPDECWPDCLGSCGMELHHPYGELGGYGIHPGGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAAAQPSFPLLSK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01514 442 Pfam B-box zinc finger 17 59 IPR000315 GO:0008270
Bach4g01514 442 MobiDBLite consensus disorder prediction 167 189 - -
Bach4g01514 442 ProSiteProfiles CCT domain profile. 385 427 IPR010402 GO:0005515
Bach4g01514 442 SMART bboxneu5 14 61 IPR000315 GO:0008270
Bach4g01514 442 MobiDBLite consensus disorder prediction 172 189 - -
Bach4g01514 442 CDD Bbox1_BBX-like 18 61 - -
Bach4g01514 442 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 429 - -
Bach4g01514 442 Pfam CCT motif 385 427 IPR010402 GO:0005515
Bach4g01514 442 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01514 Bach-Chr4 11188692 11190157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01514 4 434 C2C2-CO-like Transcription Factor Family AT1G68520 45.657 8.52e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach4g01514 zf-B_box 4.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01514 - - pcin:129311419 553.518