Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01510 ATGCCCATGAGCAATACCAACAAAAAGCACAAACAGAAAGCTTCCTTTCGGGACTCTCAAATGGGGAGAAAGCTCCGGATCATCTGCTATGATCCGGATGCTACTGATTCATCTTCAAGCGAAGACGAAGCTGAGAGGAAAACCAGAAAACTCAAACGCATCGTTCGAGAAATGAGTCTTCCTCCTCTTTTTGCTGAGAAACCTGCCGTTGAAACTGAGTATTCTGCTCAAGAGAGCAACAATGGAGGCCTTGTTTCCTACCTTGATGATCAAACCTTCAGGCGGAAGAAGGCTTTGACCGGAAACCCATCAAAGAGAAGACCCAGTGCTTCCCAGTACAGAGGTGTTCGACAGAGAAAATGGGGGAAATGGGCTGCCGAGATTCGTAACCCTCTCAAGGGGTCACGCATCTGGTTGGGAACTTACAACACAGCAGAGGAAGCTTCTCGAGCTTACGAGAGTAAAAGGTTGGAATTTGATCAAGCCATGGCCAAGCTTCAATCTGAGAAGAGCAACAACAATTCTTCTGCTGCCATTTCTCCTTCTAGAAAGAGTAACAATGTTACATACTCCCATACTGCTTCTGACTCTGAGAAGTCTGTTACTACCTCCGAGGACGCAGAGAGTGGGCTGTCTCACACTTCACCATCTTCTGTTCTGGAATTGGATACCTTAAAATCCAAAGAAAATGTCCATGGCAAGGTTTCAATCAAGGAAGAACCCGTTGAACCTGTTACTGAAACTATTGATCTGCAGATTGGATTTGCAGATCTGCAAATCCCCGATTTGAGCTTCTTGAGCATGCCACTACCACCATCTTGGCCAGCCGAGGCAGACACCAATCTAGCTTTTGACTTGGATTGGCTAGTGTACAATGATTTTTCACAGGGTTTGGATGATCTCGGTGGCCTTGAGGACTTGCAAATATGTGGTTTCAATGAGAATGAGTCAAGTGAACTACCCGATTTTAATTTAGATCTTGGTCCTGATGAGATTGCTAGTTTGACTGAGGAGCCCCTCAATGTACCTTGCGCATAA 1038 0.4557 MPMSNTNKKHKQKASFRDSQMGRKLRIICYDPDATDSSSSEDEAERKTRKLKRIVREMSLPPLFAEKPAVETEYSAQESNNGGLVSYLDDQTFRRKKALTGNPSKRRPSASQYRGVRQRKWGKWAAEIRNPLKGSRIWLGTYNTAEEASRAYESKRLEFDQAMAKLQSEKSNNNSSAAISPSRKSNNVTYSHTASDSEKSVTTSEDAESGLSHTSPSSVLELDTLKSKENVHGKVSIKEEPVEPVTETIDLQIGFADLQIPDLSFLSMPLPPSWPAEADTNLAFDLDWLVYNDFSQGLDDLGGLEDLQICGFNENESSELPDFNLDLGPDEIASLTEEPLNVPCA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01510 345 MobiDBLite consensus disorder prediction 95 116 - -
Bach4g01510 345 PIRSF PTI6 1 232 IPR017392 GO:0003700
Bach4g01510 345 PIRSF PTI6 288 332 IPR017392 GO:0003700
Bach4g01510 345 PIRSF PTI6 218 270 IPR017392 GO:0003700
Bach4g01510 345 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Bach4g01510 345 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Bach4g01510 345 Pfam AP2 domain 112 159 IPR001471 GO:0003700|GO:0006355
Bach4g01510 345 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 22 223 - -
Bach4g01510 345 MobiDBLite consensus disorder prediction 167 224 - -
Bach4g01510 345 MobiDBLite consensus disorder prediction 1 50 - -
Bach4g01510 345 Gene3D AP2/ERF domain 111 169 IPR036955 GO:0003700|GO:0006355
Bach4g01510 345 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
Bach4g01510 345 SUPERFAMILY DNA-binding domain 111 163 IPR016177 GO:0003677
Bach4g01510 345 CDD AP2 111 174 IPR001471 GO:0003700|GO:0006355
Bach4g01510 345 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01510 Bach-Chr4 11136136 11137173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01510 17 344 AP2-EREBP Transcription Factor Family AT1G68550 34.513 1.30e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach4g01510 AP2 5.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01510 - - qsa:O6P43_032756 293.508